Massilia sp. WG5: AM586_20195
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Entry
AM586_20195 CDS
T04122
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
masw
Massilia sp. WG5
Pathway
masw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
masw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AM586_20195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
masw03400
]
AM586_20195
Enzymes [BR:
masw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AM586_20195
DNA repair and recombination proteins [BR:
masw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AM586_20195
Prokaryotic type
AM586_20195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
ALK99744
LinkDB
All DBs
Position
complement(1695508..1696278)
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AA seq
256 aa
AA seq
DB search
MPTTAIPAPILDALGLADPSWRPHLEAGLQAMAAFDPAYLPTLAGDDYLPNGGRLFAAFA
LPLPQVRYVLVGEGPYPRPESATGVCFMDGAVGELWSETGLSKPVNRATSLRNFMKMLLV
ADGQLGIDDTGGAALAPIARAAREGGAIRTLAELQDKLTGQGFLLLNASLVFRKHVAPAV
DARAWLPFQRAVFAALAQCAQKPTLVLWGKIAEQLKKVPETEGLPQIQAEHPYNLSFIGH
EGMHKLFGPMQLLHAS
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgccgactaccgcgatcccagcaccgattctcgacgccctcggccttgccgatccctcc
tggcgtccgcacctcgaagccggcctgcaggccatggcggcgttcgatcccgcctacctg
cccacgcttgccggcgacgattacctgccgaacggcggccgcctgttcgcggccttcgcg
ctgccgctgccgcaggtgcgctacgtgctggtgggggaggggccgtatccgcgtccggaa
agcgcgaccggggtctgcttcatggatggcgcggtgggcgagctgtggtcggagacggga
ttgtcgaaaccggtgaaccgcgcgacctcgctgcgcaacttcatgaagatgctgctggtc
gccgacggccagctcggcatcgacgataccggcggcgcggcgctggcgccgatcgctagg
gcggcgcgggagggcggcgcgatccgcaccctggccgagctgcaagacaagctgaccggg
cagggtttcctgctgctgaacgcctcgctggtcttccgcaagcacgtcgccccggcggtc
gacgcgcgcgcctggctgcccttccagcgcgccgtattcgcggccctggcgcaatgcgca
cagaagccgaccctggtcctgtggggcaagatcgccgaacagttgaaaaaagtgccggaa
accgaaggcctgccccagatccaggcggaacacccctacaacctcagcttcattggccac
gagggcatgcacaagctgttcgggccgatgcaactgctgcacgcaagctga
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