Massilia sp. WG5: AM586_21175
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Entry
AM586_21175 CDS
T04122
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
masw
Massilia sp. WG5
Brite
KEGG Orthology (KO) [BR:
masw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
masw03016
]
AM586_21175
Enzymes [BR:
masw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AM586_21175
Transfer RNA biogenesis [BR:
masw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AM586_21175
Prokaryotic type
AM586_21175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ALK98318
LinkDB
All DBs
Position
complement(1900799..1901599)
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AA seq
266 aa
AA seq
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MTRIALGVQYIGTAWNGYQKQPSRDTVQDQLEIALEKFACTRLATTCAGRTDAGVHAIEQ
VVHFDTELDRAPQSWVRGTNAFLPDSIVVRWAHVVAPDAEGQDFHARFSARSRTYHYVLY
NHPNPSALLAGRAGWVFRPLDVERMREAAGHLIGTHDFSSFRASGCQANSPVKQMHELNI
VRHGDVIVFTVRASAFLHHMVRNIVGSLVYVGTGRNQPGWMAEVLAARSRDAAAPTFMPD
GLYLATIDYDPKWGLPQEATPPLPWL
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
gtgacaagaatcgcattgggtgtccagtacatcggcaccgcctggaacgggtatcagaaa
caaccgtcgcgcgacacggtgcaggaccagctcgagatcgctctcgagaagttcgcctgc
accaggctcgccaccacctgcgccggccgcaccgacgccggcgtccacgccatcgaacag
gtggtccacttcgacacggaactcgaccgcgcgccgcaatcctgggtgcgcggcacgaat
gccttcctgcccgattcgattgtggtgcgctgggcgcacgtggtcgcgccggacgcggaa
gggcaggacttccatgcgcgcttctcggcccgctcgcgcacctatcactacgtgctgtac
aaccatccgaacccatcggccctgctggccgggcgcgccggctgggtgttccgcccgctg
gacgtggagcgcatgcgcgaggccgccgggcacctgatcggcacgcacgacttcagcagc
ttccgcgcctccggctgccaggcgaattcgcccgtcaagcagatgcacgagctgaacatc
gtgcgccacggcgacgtgatcgtgttcacggtgcgcgcctcggccttcctgcaccacatg
gtgcgcaacatcgtcggctcgctggtctacgtgggcaccggccgcaaccagccgggctgg
atggccgaggtcctggccgcccgctcgcgcgacgccgccgccccgaccttcatgcccgac
ggtttgtatcttgctacaatcgactacgatccgaagtgggggctgccgcaggaggcgacg
ccaccgctgccctggttatga
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