Massilia sp. WG5: AM586_24375
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Entry
AM586_24375 CDS
T04122
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
masw
Massilia sp. WG5
Brite
KEGG Orthology (KO) [BR:
masw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
masw03016
]
AM586_24375
Enzymes [BR:
masw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AM586_24375
Transfer RNA biogenesis [BR:
masw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AM586_24375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
ALK98864
LinkDB
All DBs
Position
complement(2645162..2647222)
Genome browser
AA seq
686 aa
AA seq
DB search
MNVFFEESGDFKVGAVLSQAGEAYQVEMPSGKRTKVKSRDVLLQFDKPSPAELLEQAKAI
ALEVDLEFLWEVAGQEEFGFTELGAEYFGHAPLPFEAAGLVLALHNAPIYFYKKGRGRYK
AAPEQSLRAALAGIEKKKQQAIVQASYVEELKAGRLPAAMQPLVQQLLFKPDKNSIEYKA
LETAASELQTTPQRLMLTTRGIASAKELHMARFLFEHFPRGAGFPQVTVPGAPADLPLAR
VAAFSIDDVTTTEIDDALSVEHLDDGMVRVGIHIAAPGLGIRPDDAIDKIARARMSTVYM
PGDKITMLPDEIVEAFTLAEGKDCPALSLYATLNPENWSVLSTETRAERVPIKTNLRLNE
LDALVTEEVLESGAGDYPHKDELGLLWKWALQLEAGRMKKREAFGLKPEQANRVDFNFYV
EDDVVTIVRRKRGAPLDKIVAELMIFANSTWGKLLHDSGVPGIYRSQGPGAGGWNAKIQV
RMVTHAAPHQGLGVDQYAWSTSPLRRYTDLVNQWQILACASNGVTAPLVAPFKHRDATLF
SIVSAFDAAYAAYNEFQQNMERYWCLRWLGQENARQVDAVVLKDEVLRLVEIPLVIRLPG
MQQVARGAQVRMDIVRWDEVDLSLEARLLEVAEPTPEAAAALELEEEEEAAAETADTGEA
AAAEAVEAEGSVTVTDPASQTDVPAT
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtatttttcgaagaatccggcgatttcaaggtcggcgccgtgctgtcgcaggca
ggtgaggcctaccaggtcgaaatgccgagcggtaagcggaccaaggtcaagtcgcgcgat
gtgctgctgcagttcgacaagccgtccccggccgaactgctggagcaggccaaggcgatc
gcgctcgaggtcgacctcgaattcctgtgggaagtcgcaggccaggaagagttcggtttt
accgaactgggcgccgaatacttcggccacgcgccgctgccgttcgaggccgccggcctg
gtgctggcgctgcacaatgcgcccatctatttctacaagaagggccgcggccgctacaag
gccgcgcccgaacagtcgctgcgcgcggccctggccggtatcgaaaagaagaagcagcag
gccatcgtgcaggcctcctatgtcgaggaactgaaggccggccgcctgccggcggcgatg
cagccgctggtgcagcagctgctcttcaagccggacaagaacagcatcgagtacaaggcg
ctggaaaccgccgccagcgaactgcagaccaccccgcagcgcctgatgctgaccaccagg
ggcatcgcctcggccaaggaactgcacatggcacgcttcctgttcgagcacttcccgcgc
ggcgccggcttcccgcaagtgacggtgccgggtgcgccggccgacctgccgctggcgagg
gtggcggcgttctcgatcgacgacgtgaccaccaccgagatcgacgacgccctgtcggtc
gagcacctggacgacggcatggtgcgggtcggcatccacatcgccgcgccgggcctgggc
atccgtccggacgacgcgatcgacaagatcgcgcgcgcgcgcatgtcgaccgtctatatg
ccgggcgataagatcaccatgctgccggacgagatcgtggaagccttcactctcgccgaa
ggcaaggattgcccggcgctgtcgctgtacgccacgctgaatccggagaactggtcggtg
ctgtcgaccgagacccgcgccgagcgcgtgccgatcaagaccaacctgcgccttaatgaa
ctcgacgccctggtgaccgaggaagtgctggagagcggcgcgggcgactatccgcacaag
gacgagctgggcctgctgtggaagtgggcgctgcagctcgaagccggccgcatgaaaaag
cgcgaagccttcggcctgaagccggaacaggcgaatcgcgtcgacttcaacttctacgtc
gaggacgacgtggtcaccatcgtgcgccgcaagcgcggcgcgccgctggacaagatcgtg
gccgagctgatgatcttcgccaacagcacctggggcaagctgctgcacgactccggcgtg
ccgggcatctatcgctcgcaggggccgggcgcgggcggctggaacgccaagatccaggtg
cgcatggtgacccacgcggcgccgcaccagggcctgggcgtcgaccagtacgcctggagt
acctcgccgctgcgccgctataccgacctggtgaaccagtggcagatcctggcctgcgcc
tcgaacggcgtgacggcgccgctggtggccccgttcaagcaccgcgacgcgaccctgttc
tcgattgtctcagccttcgacgcggcctacgcggcgtataacgaattccagcagaacatg
gagcgctactggtgcctgcgctggctgggccaggaaaacgcgcgccaggtcgatgcggtg
gtgctgaaggacgaggttctgcgcctggtcgagatcccgctggtgatccgcctgccgggc
atgcagcaggtggcgcgcggcgcccaggtgcgcatggacatcgtgcgctgggacgaagtc
gacctgtcgctggaagcccgcctgctcgaggtggccgagccgacgccggaagcggcggcc
gcgctcgaactcgaggaggaagaggaagcggctgccgaaaccgcggataccggcgaggcg
gcggctgcggaagcggtcgaggccgaaggctcggtgacggtgaccgatccggcttcgcag
acggatgtgccggcgacctga
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