Massilia sp. WG5: AM586_24745
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Entry
AM586_24745 CDS
T04122
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
masw
Massilia sp. WG5
Pathway
masw03420
Nucleotide excision repair
masw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
masw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AM586_24745
03430 Mismatch repair
AM586_24745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
masw03400
]
AM586_24745
Enzymes [BR:
masw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AM586_24745
DNA repair and recombination proteins [BR:
masw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AM586_24745
MMR (mismatch excision repair)
Other MMR factors
AM586_24745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ALK98925
LinkDB
All DBs
Position
2721433..2723484
Genome browser
AA seq
683 aa
AA seq
DB search
MSTQANSQQAAILQSPNKVKLIDAVAGAGKTTTLAMEARQACADGLSGRAILALCFSRGA
RLRFHEKLKEEVSEDSATFVMTVEDFARQLIEDLAEKGRITRPVIHQDVEGIRGELVAAA
DRVWQRYQERGIRSDFNFGLDENNQHLDDIARRLAQLKAALATGAFAPKDNASHDDDALD
DDAADYDESGDGDLAGQPDPVADIIREYEAARHPYPEEFRWQGPNDAVTDLVYLLQRQPA
LAQDLRRWSLYLVDEWHDVNAAEFELLARLRRGARLVVAGDKDQTINRDRGADPVFSGQR
FADTYRADGKRFPLGMSYRFGQDAAVLADGLTHNGCEGRPDRDTLVRRVAYDPSQPGDCA
RLVADTIRTALAKGRPKPSNRDFAVVLRDVDQSIEIETALMEAKIPYKCDGFETFLLLPE
ILLLRGILHYVGNDYSALRGHAETCVQMVLALSRYFYLTRDPKHWNLQWGERQSVLAYAQ
QEVRRTPEVLKSFFDGALLRETEFDSPQARQSKNLIRPVIARMASLAGSATAYELLTMLR
KEVDLHDATSRAFVSRDRVASARRSIDAFLRFASSHGQVPAAEFLATLTHMENDVALVRR
SKNANSIGTRRSLVRVTTIQAAKGREWPYVLVPFLAQDEFVRTRDAANEVRHLYVGLTRV
MKELVLFEPDEGHADRRLAYLNS
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcaagcaaacagccagcaagccgccatcctccaatctcccaacaaggtcaag
ctgatcgacgccgtggccggcgccggcaagaccaccacgctggcgatggaggcgcgccag
gcctgcgccgacgggctgtccgggcgcgccatcctggccctgtgcttttcgcgcggcgcg
cgcctgcgcttccatgaaaagctgaaggaagaagtatcggaggacagcgccaccttcgtg
atgacggtcgaggacttcgcgcgccagctgatcgaggacctggccgagaagggccgcatt
acccggcctgtcatccaccaggacgtcgagggcatccgcggcgaactagtcgctgccgcc
gaccgcgtctggcagcgctaccaggaacgcggcatccgcagcgacttcaatttcggcctc
gacgagaacaaccagcacctggacgacatcgcgcgccgcctggcccagctgaaggccgcg
ctggcgaccggggccttcgcgccgaaggacaatgcctcccacgacgacgacgccctggac
gacgatgccgcggactatgacgaaagcggcgacggcgacctggccggccagcccgatccg
gtcgcggacatcatccgcgaatacgaggcggcgcgccatccctaccccgaggaattccgc
tggcagggcccgaacgatgcggtgaccgacctggtctacctgctgcagcgccagcccgcg
ctggcccaggacctgcgccgctggtcgctctacctggtcgacgaatggcacgacgtgaac
gcggccgagttcgaactgctggcgcggctgcggcgcggcgcgcgcctggtggtggccggc
gacaaggaccagaccatcaaccgcgaccgcggcgccgatccggtcttttccggccagcgt
ttcgcggacacctaccgcgccgacggcaaacgcttcccgctggggatgtcctaccgcttc
ggccaggatgccgccgtgctggcggacggcctgacccacaacggctgcgaaggccgcccc
gaccgcgacaccctggtgcgccgcgtcgcctacgatccgtcgcagccgggcgactgcgcg
cgcctggtggccgacaccatccgcaccgcgctggcgaagggccggcccaagccgagcaac
cgcgacttcgccgtggtgctgcgcgacgtcgaccagagcatcgagatcgagaccgcgctg
atggaagcgaagatcccgtacaagtgcgacggcttcgagaccttcctgctgctgccggag
atcctgctgctgcgcgggatcctgcactacgtgggcaacgactacagcgccctgcgcggc
catgccgagacctgcgtgcagatggtgctggcgctgtcgcgctacttctatctcacgcgc
gacccgaagcactggaacctgcagtggggcgagcgccagtcggtgctggcgtatgcgcag
caggaagtacggcgcacaccggaggtgctgaagagcttcttcgacggcgccctgctgcgc
gagaccgagttcgacagcccgcaggcgcgccagtccaagaacctgatccggccggtgatc
gcgcgcatggcctcgctggccggctccgcgaccgcctacgaactgctgaccatgctgcgc
aaggaggtcgacctgcacgacgccaccagccgcgccttcgtcagccgcgaccgcgtggcc
tcggcacggcgctcgatcgacgccttcctgcgctttgcatcgagccacggccaggtgccg
gcggccgagttcctggccaccctgacgcacatggaaaacgacgtcgcgctggtgcgcagg
tcgaagaatgccaacagcatcggcacgcggcgcagcctggtgcgggtcaccaccatccag
gcggccaaggggcgcgagtggccttatgttctggtgcccttcctggcgcaggacgagttc
gtgcggaccagggatgccgccaatgaggtgcggcatctgtatgtgggtttgacgcgggtg
atgaaggaactggtgctgttcgaaccggatgaggggcatgccgacaggcgcctggcttac
ctgaatagttag
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