Massilia sp. WG5: AM586_25445
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Entry
AM586_25445 CDS
T04122
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
masw
Massilia sp. WG5
Pathway
masw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
masw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AM586_25445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masw03019
]
AM586_25445
Enzymes [BR:
masw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
AM586_25445
Messenger RNA biogenesis [BR:
masw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AM586_25445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
DUF2204
Motif
Other DBs
NCBI-ProteinID:
ALK99042
LinkDB
All DBs
Position
2879057..2880448
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AA seq
463 aa
AA seq
DB search
MIKKFIRKILGVKDERDPTQPVILGPEEHGIDPKLLSPNAVRVTQTLQEAGFKAFVVGGA
VRDLLLGVKPKDFDIATDATPEEVKKLFRRAFIIGRRFQIVHVMFGQELLEVTTFRGNAA
VNAPKDEHGRVLRDNNFGPQHEDAERRDFTINAMYYDPATQSVLDYHGGIQDIRDKVLRI
IGQPEARYREDPVRMLRVVRFAAKLQFTIEPATRAPIPVMAPLINNVPAARVFDEMLKLL
QSGHSLACLKELRASGLHHGLLPLLDVVLEQPIGMKFVTLALESTDARVKAGKGVSAGFL
FASLLWHQVLEKWNAYRAAGEAPIPALHLAADDVLDNQTDSLALQRRIATDMRDIWAMQP
RFERRTGKSPYKLLEHPRFRAGFDFLLLRCESGELDAELGNWWATFYGADVNERERLINS
AREPQGAAAQKKRPRRRGPRKAEGDGAFQPDAGAPQSAAPDGE
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaaaattcatccgcaagatcctcggcgtgaaagacgagcgcgaccccacccag
ccggtcatcctcggcccggaagaacacggcatcgacccgaagctgctgtcgcccaatgcg
gtgcgcgtcacccagaccctgcaggaagccggcttcaaggctttcgtggtcggcggcgcc
gtgcgcgacctgctgctgggcgtgaagccgaaggacttcgacatcgccaccgacgctacc
ccggaagaggtcaagaagctgttccggcgcgccttcatcatcggccgccgcttccagatc
gtgcacgtgatgttcggccaggaactgctggaggtgaccaccttccgcggcaacgccgcc
gtcaacgcgccgaaggacgagcatggccgggtgctgcgcgacaataacttcggtccgcag
cacgaggatgccgagcggcgcgacttcaccatcaacgccatgtactacgacccggcgacc
cagtcggtgctcgactaccacggcggcatccaggacatccgcgacaaggtcctgcgcatc
atcggccagccggaagcgcgctaccgcgaagacccggtgcgcatgctgcgcgtggtgcgc
ttcgccgccaagctgcagttcacgatcgagccggccacccgcgcgccgatcccggtgatg
gcgcccctgatcaacaacgtgccggccgcgcgcgtgttcgacgagatgctcaagctgctg
cagtccggccactcgctggcctgcctgaaggagctgcgcgcttccggcctgcaccacggc
ctgctgccgctgctggacgtggtgctggagcagccgatcggcatgaagttcgtgaccctg
gcgttggaatcgaccgacgcccgcgtcaaggccggcaagggcgtctcggccggtttcctg
ttcgcctcgctgctgtggcaccaggtgctggaaaagtggaatgcctaccgcgccgccggc
gaagcgccgatcccggccctgcacctggccgccgacgacgtgctggacaaccagaccgac
agcctggccctgcagcgccgcatcgccaccgacatgcgcgacatctgggccatgcagccg
cgcttcgagcgccgcaccggcaagtcgccctataaactgctggagcatccgcgcttccgc
gccggtttcgacttcctgctgctgcgctgcgaatcgggcgagctcgatgcggagctgggc
aactggtgggccaccttctacggcgccgacgtgaacgagcgcgagcgcctgatcaactcc
gcgcgcgagccgcagggcgccgccgcccagaagaagcgcccgcgccgccgcggtccgcgc
aaggccgaaggggacggcgccttccagcccgatgccggcgcgccgcagtccgcggccccc
gacggcgaatga
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