Marinibacterium sp. SX1: ACK3BB_20930
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Entry
ACK3BB_20930 CDS
T11524
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
masx Marinibacterium sp. SX1
Pathway
masx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
masx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACK3BB_20930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
masx03021
]
ACK3BB_20930
03400 DNA repair and recombination proteins [BR:
masx03400
]
ACK3BB_20930
Enzymes [BR:
masx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACK3BB_20930
Transcription machinery [BR:
masx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACK3BB_20930
DNA repair and recombination proteins [BR:
masx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACK3BB_20930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
Glyco_hydro_65C
Motif
Other DBs
NCBI-ProteinID:
XTP48784
LinkDB
All DBs
Position
complement(4623397..4624413)
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AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPTQLDVKPGNDPARRATVVAEPLERGFGLTLGNALRRILLSSLQGAAIT
SVQIDNVLHEFSSVAGVREDVTDIVLNLKGVALRMEVEGPKRLSISAKGPMVVTAGAISE
SAGIEVLNPDHVICHLDDGADLYMELTVNTGKGYVSADKNKPEDAPIGLIPIDAIYSPVK
KVSYDVQPTREGQVLDYDKLTMKVETDGSISPDDAVAFAARILQDQLSIFVNFDEPEAAG
RQDEDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPDNIEDLAKKYEDAF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccataagaactgggccgaactgatcaagccgacgcagcttgacgtcaagccgggc
aatgatcccgcgcgtcgcgccaccgtcgtcgccgaaccgctcgaacgcgggttcggcctg
acattgggcaacgcgcttcgccgcatcctcctgtcgtcgctccagggcgcggccatcacc
agcgttcagatcgacaacgtcctgcacgaattctcgtcggttgccggcgtgcgtgaagat
gtgaccgatatcgtcctgaacctcaagggcgttgccctgcgcatggaagtcgaagggccc
aagcgcctgtcgatctcggccaaggggccgatggttgtcaccgccggcgcgatttccgaa
agcgcggggatcgaggtgctgaaccccgatcacgtgatctgccatctcgacgatggtgcc
gatctttacatggaactgacggtcaacaccggcaagggctatgtgtcggccgacaagaac
aagccggaagacgcgccgatcgggctgatcccgatcgatgcgatctattcgccggtcaag
aaggtgtcgtatgacgtccagcccacccgcgagggccaggttctggattacgacaagctg
accatgaaggtcgagacggacgggtcgatctcgccggatgatgccgtggcctttgccgcg
cggatcctgcaggaccagctgtcgatcttcgtgaacttcgacgagccggaagcggctggc
cgccaggacgaggacgacgggctggaattcaacccgctgcttctcaagaaggtcgacgag
ctggaactgtcggtccgttcggccaactgcctgaagaacgacaacatcgtctatatcggc
gatctgatccagaagaccgaggccgagatgctgcggacgcccaactttgggcggaagtcg
ctgaacgagatcaaggaagtgctgtcgggcatgggtctgcaccttggcatggatgtcgag
gactggccgccggacaacatcgaagacctggcgaagaaatacgaagacgcgttctga
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