Massilia sp. YMA4: DPH57_00865
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Entry
DPH57_00865 CDS
T05528
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
masy
Massilia sp. YMA4
Pathway
masy00010
Glycolysis / Gluconeogenesis
masy00020
Citrate cycle (TCA cycle)
masy00260
Glycine, serine and threonine metabolism
masy00280
Valine, leucine and isoleucine degradation
masy00310
Lysine degradation
masy00380
Tryptophan metabolism
masy00620
Pyruvate metabolism
masy00630
Glyoxylate and dicarboxylate metabolism
masy00640
Propanoate metabolism
masy00670
One carbon pool by folate
masy00785
Lipoic acid metabolism
masy01100
Metabolic pathways
masy01110
Biosynthesis of secondary metabolites
masy01120
Microbial metabolism in diverse environments
masy01200
Carbon metabolism
masy01210
2-Oxocarboxylic acid metabolism
masy01240
Biosynthesis of cofactors
Module
masy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
masy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
masy_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
masy_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
masy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
DPH57_00865 (lpdA)
00020 Citrate cycle (TCA cycle)
DPH57_00865 (lpdA)
00620 Pyruvate metabolism
DPH57_00865 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
DPH57_00865 (lpdA)
00640 Propanoate metabolism
DPH57_00865 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DPH57_00865 (lpdA)
00280 Valine, leucine and isoleucine degradation
DPH57_00865 (lpdA)
00310 Lysine degradation
DPH57_00865 (lpdA)
00380 Tryptophan metabolism
DPH57_00865 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DPH57_00865 (lpdA)
00670 One carbon pool by folate
DPH57_00865 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
masy04147
]
DPH57_00865 (lpdA)
Enzymes [BR:
masy01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
DPH57_00865 (lpdA)
Exosome [BR:
masy04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
DPH57_00865 (lpdA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
AlaDh_PNT_C
Pyr_redox_3
FAD_oxidored
NAD_binding_8
FAD_binding_2
GIDA
HI0933_like
FAD_binding_3
3HCDH_N
2-Hacid_dh_C
Amino_oxidase
Thi4
Lycopene_cycl
DAO
Motif
Other DBs
NCBI-ProteinID:
AXA89852
UniProt:
A0A7U6B3X0
LinkDB
All DBs
Position
190701..192131
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AA seq
476 aa
AA seq
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MSKQFDVVVIGAGPGGYIAAIRAAQLGFSVACIDEWANEKGGPAPGGTCTNVGCIPSKAL
LQSSEHFEHAGHAFKEHGIDVAGLSLNLPQMLKRKNTVVKQNNDGILFLFKKNKVTFFHG
RGAFAGAATGEGYPIEISGPTAETIVGKQIIVATGSNARALPGAPFDEKLILSNTGALAI
DAVPAKLGVIGAGVIGLEMGSVWRRLGAEVTVLEGLPTFLGAVDEQIAKEAFKMFTKQGL
GIHLGVKIDSVTTGGNNVTVKYTDAKGAAQEGTFDKLIVSIGRTPNTNGLNADKAGLKLD
ERGFIAVDGDCKTNLPNVWAIGDVVRGPMLAHKAEEEGVAVAERIAGQHGHTNFDTIPWV
IYTSPEIAWVGRTEQQLKADGVAYKAGTFPFLANGRARALGDTSGMVKFLADATTDEILG
VHIIGPMASELISEAVVAMEFKASAEDIARICHAHPSLSEATKEAALAIDKRTLNF
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagcaatttgatgtggtagtgatcggcgccggtcccggcggctatatcgcggcg
atccgcgcggctcagctgggcttctccgtcgcctgtatcgacgagtgggccaacgaaaaa
ggcggcccggcaccgggcggcacctgcaccaacgtgggctgcatcccgtccaaggcactg
ctgcagtcgtccgagcacttcgagcatgccggccacgcgttcaaggaacacggcatcgac
gtcgccggcctgtcgctgaacctgccgcagatgctcaagcgtaagaacacggtcgtcaag
cagaacaacgacggcatcctgttcctgttcaagaagaacaaggtcaccttcttccacggc
cgcggcgcgttcgccggtgccgccaccggcgaaggctacccgatcgagatctccggcccg
acggctgaaacgatcgtcggcaagcagatcatcgtggcgacgggctcgaatgcccgcgcg
ctgccgggcgcaccgttcgacgagaaactgatcctgtcgaacacgggcgcgctggcgatc
gatgccgtgccggccaagctgggcgtcatcggcgccggcgtgatcggcctggaaatgggc
tccgtgtggcgccgcctgggcgcggaagtgaccgtgctggaaggcctgccgacgttcctg
ggcgcggtcgacgagcagatcgccaaggaagcgttcaagatgttcaccaagcagggcctg
ggcatccacctgggcgtgaagatcgacagcgtgacgacgggcgggaacaacgtcaccgtc
aagtacacggacgccaagggcgccgcgcaggaaggcacgttcgacaagctgatcgtctcg
atcggccgcacgccgaacaccaacggcctgaacgccgacaaggccggcctgaagctggac
gagcgcggcttcatcgccgtcgacggcgactgcaagaccaacctgccgaacgtgtgggcg
atcggcgacgtcgtgcgcggcccgatgctggcgcacaaggcggaagaggaaggcgtcgcc
gtggccgagcgtatcgccggccagcacggtcacaccaacttcgacacgattccctgggtg
atctacacgtcgccggaaatcgcctgggtcggcaggacggaacaacagctcaaggccgat
ggcgtggcctacaaggccggcacgttcccgttcctggcgaacggccgcgcccgcgcgctg
ggcgacacctccggcatggtcaagttcctggccgacgcgacgaccgatgaaatcctgggc
gtccacatcatcggcccgatggcttccgagctgatctccgaagccgtcgtggcgatggag
ttcaaggcttcggccgaggacatcgcccgcatctgccacgcccacccttcgctgtcggaa
gcgaccaaggaagcggccctggcaatcgacaagcgcacgctgaacttctaa
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