KEGG   Massilia sp. YMA4: DPH57_00865
Entry
DPH57_00865       CDS       T05528                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
masy  Massilia sp. YMA4
Pathway
masy00010  Glycolysis / Gluconeogenesis
masy00020  Citrate cycle (TCA cycle)
masy00260  Glycine, serine and threonine metabolism
masy00280  Valine, leucine and isoleucine degradation
masy00310  Lysine degradation
masy00380  Tryptophan metabolism
masy00620  Pyruvate metabolism
masy00630  Glyoxylate and dicarboxylate metabolism
masy00640  Propanoate metabolism
masy00670  One carbon pool by folate
masy00785  Lipoic acid metabolism
masy01100  Metabolic pathways
masy01110  Biosynthesis of secondary metabolites
masy01120  Microbial metabolism in diverse environments
masy01200  Carbon metabolism
masy01210  2-Oxocarboxylic acid metabolism
masy01240  Biosynthesis of cofactors
Module
masy_M00009  Citrate cycle (TCA cycle, Krebs cycle)
masy_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
masy_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
masy_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:masy00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    DPH57_00865 (lpdA)
   00020 Citrate cycle (TCA cycle)
    DPH57_00865 (lpdA)
   00620 Pyruvate metabolism
    DPH57_00865 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    DPH57_00865 (lpdA)
   00640 Propanoate metabolism
    DPH57_00865 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    DPH57_00865 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    DPH57_00865 (lpdA)
   00310 Lysine degradation
    DPH57_00865 (lpdA)
   00380 Tryptophan metabolism
    DPH57_00865 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    DPH57_00865 (lpdA)
   00670 One carbon pool by folate
    DPH57_00865 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:masy04147]
    DPH57_00865 (lpdA)
Enzymes [BR:masy01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     DPH57_00865 (lpdA)
Exosome [BR:masy04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   DPH57_00865 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox AlaDh_PNT_C Pyr_redox_3 FAD_oxidored NAD_binding_8 FAD_binding_2 GIDA HI0933_like FAD_binding_3 3HCDH_N 2-Hacid_dh_C Amino_oxidase Thi4 Lycopene_cycl DAO
Other DBs
NCBI-ProteinID: AXA89852
UniProt: A0A7U6B3X0
LinkDB
Position
190701..192131
AA seq 476 aa
MSKQFDVVVIGAGPGGYIAAIRAAQLGFSVACIDEWANEKGGPAPGGTCTNVGCIPSKAL
LQSSEHFEHAGHAFKEHGIDVAGLSLNLPQMLKRKNTVVKQNNDGILFLFKKNKVTFFHG
RGAFAGAATGEGYPIEISGPTAETIVGKQIIVATGSNARALPGAPFDEKLILSNTGALAI
DAVPAKLGVIGAGVIGLEMGSVWRRLGAEVTVLEGLPTFLGAVDEQIAKEAFKMFTKQGL
GIHLGVKIDSVTTGGNNVTVKYTDAKGAAQEGTFDKLIVSIGRTPNTNGLNADKAGLKLD
ERGFIAVDGDCKTNLPNVWAIGDVVRGPMLAHKAEEEGVAVAERIAGQHGHTNFDTIPWV
IYTSPEIAWVGRTEQQLKADGVAYKAGTFPFLANGRARALGDTSGMVKFLADATTDEILG
VHIIGPMASELISEAVVAMEFKASAEDIARICHAHPSLSEATKEAALAIDKRTLNF
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgagtaagcaatttgatgtggtagtgatcggcgccggtcccggcggctatatcgcggcg
atccgcgcggctcagctgggcttctccgtcgcctgtatcgacgagtgggccaacgaaaaa
ggcggcccggcaccgggcggcacctgcaccaacgtgggctgcatcccgtccaaggcactg
ctgcagtcgtccgagcacttcgagcatgccggccacgcgttcaaggaacacggcatcgac
gtcgccggcctgtcgctgaacctgccgcagatgctcaagcgtaagaacacggtcgtcaag
cagaacaacgacggcatcctgttcctgttcaagaagaacaaggtcaccttcttccacggc
cgcggcgcgttcgccggtgccgccaccggcgaaggctacccgatcgagatctccggcccg
acggctgaaacgatcgtcggcaagcagatcatcgtggcgacgggctcgaatgcccgcgcg
ctgccgggcgcaccgttcgacgagaaactgatcctgtcgaacacgggcgcgctggcgatc
gatgccgtgccggccaagctgggcgtcatcggcgccggcgtgatcggcctggaaatgggc
tccgtgtggcgccgcctgggcgcggaagtgaccgtgctggaaggcctgccgacgttcctg
ggcgcggtcgacgagcagatcgccaaggaagcgttcaagatgttcaccaagcagggcctg
ggcatccacctgggcgtgaagatcgacagcgtgacgacgggcgggaacaacgtcaccgtc
aagtacacggacgccaagggcgccgcgcaggaaggcacgttcgacaagctgatcgtctcg
atcggccgcacgccgaacaccaacggcctgaacgccgacaaggccggcctgaagctggac
gagcgcggcttcatcgccgtcgacggcgactgcaagaccaacctgccgaacgtgtgggcg
atcggcgacgtcgtgcgcggcccgatgctggcgcacaaggcggaagaggaaggcgtcgcc
gtggccgagcgtatcgccggccagcacggtcacaccaacttcgacacgattccctgggtg
atctacacgtcgccggaaatcgcctgggtcggcaggacggaacaacagctcaaggccgat
ggcgtggcctacaaggccggcacgttcccgttcctggcgaacggccgcgcccgcgcgctg
ggcgacacctccggcatggtcaagttcctggccgacgcgacgaccgatgaaatcctgggc
gtccacatcatcggcccgatggcttccgagctgatctccgaagccgtcgtggcgatggag
ttcaaggcttcggccgaggacatcgcccgcatctgccacgcccacccttcgctgtcggaa
gcgaccaaggaagcggccctggcaatcgacaagcgcacgctgaacttctaa

DBGET integrated database retrieval system