Massilia sp. YMA4: DPH57_02515
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Entry
DPH57_02515 CDS
T05528
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
masy
Massilia sp. YMA4
Brite
KEGG Orthology (KO) [BR:
masy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
masy03400
]
DPH57_02515
DNA repair and recombination proteins [BR:
masy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DPH57_02515
Archaeal homologous recombinant proteins
DPH57_02515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AXA90139
LinkDB
All DBs
Position
complement(547086..548324)
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AA seq
412 aa
AA seq
DB search
MRLLHTSDWHLGQSLHNFDRQYEHQCFLDWLVETIVAEQADALLIAGDVFDNANPSAASQ
RQLYRFLQQARARVPGLDIVVTAGNHDSPGRIEAPGPLLEAHGTQVVGHVQRDAAGNIDV
ARLVVPLTNRAGAVAAWCLAVPFLRPADVPRANQEGAEAADGYLAGIAELYARAQAHALA
LRQPGQAIVAMGHCHMVDGQMSSDSERRIVIGGTEMLPAGMFGPDVAYAALGHLHLAQQI
GRHGHIRYSGSPIPLSFSEVHYQHQVLRIDLDGGTLQDVVPIPVPRAVHLLRVPSRPAPL
AQVLDELEALDFPPAPAYAQPFVEVRVLLDAPEPGLRSRIEAALEGKHVRLAKIDTASAA
RGPSLVDAAVSLDQLAQLQPDEVFARLYRQKYGNEAPPDQVAAFAELLLAGA
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgctgcacacctcggactggcacctcggccagtcgctccacaacttcgaccgc
caatacgaacaccagtgcttcctggactggctggtcgagacgatcgtggccgaacaggcc
gacgcgctgctgatcgccggcgacgtgttcgacaacgccaacccgtcggccgcctcgcag
cgccagttgtaccgcttcctgcagcaggcgcgcgcccgcgtgccgggcctggacatcgtc
gtcacggccggcaaccacgactcgcccggccgcatcgaggcgcccgggccgctgctggag
gcgcacggcacccaggtggtgggccacgtgcagcgcgatgccgccggcaatatcgacgtg
gcgcgcctggtggtgccgctgacgaaccgggccggcgccgtcgcggcatggtgcctggcg
gtgccgttcctgcgtccggccgacgtgccgcgcgcgaaccaggaaggcgccgaggcggcg
gacggctacctggccggcatcgccgaactgtacgcccgcgcccaggcccatgcgctggcc
ctgcgccagccgggccaggccatcgtcgcgatgggccactgccacatggtggacgggcag
atgtcgagcgactcggagcgccgcatcgtcatcggcggcaccgagatgctgccggccggg
atgttcgggccggacgtggcctacgcggccctggggcacctgcacctggcgcagcagatc
ggccgccacggccacatccgctacagcggcagcccgatcccgctgtcgttctcggaagtg
cactaccagcaccaggtgctgcgcatcgacctcgatggcggcaccttgcaggacgtcgtg
ccgatcccggtgccgcgtgccgtgcacctgctgcgggtgccgtcgcgcccggccccgctg
gcgcaggtgctggacgagctggaagcgctcgacttcccgccagcgcccgcatacgcgcag
ccgttcgtcgaggtgcgcgtgctgctggacgcgcccgagccgggcctgcgttcgcgcatc
gaggcggcgctggagggcaagcacgtgcgcctggccaagatcgatacggccagcgccgcg
cgcggcccctcgctggtcgatgccgccgtctcgctcgaccagctggcgcagttgcagccg
gacgaggtgttcgcccgcctgtaccgccagaagtacggcaacgaggccccgcccgaccag
gtggcggccttcgccgaactgctgctggcgggagcgtaa
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