Massilia sp. YMA4: DPH57_03375
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Entry
DPH57_03375 CDS
T05528
Name
(GenBank) NADH-quinone oxidoreductase subunit F
KO
K22515
formate dehydrogenase beta subunit [EC:
1.17.1.9
]
Organism
masy
Massilia sp. YMA4
Pathway
masy00630
Glyoxylate and dicarboxylate metabolism
masy00680
Methane metabolism
masy01100
Metabolic pathways
masy01120
Microbial metabolism in diverse environments
masy01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
masy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DPH57_03375
09102 Energy metabolism
00680 Methane metabolism
DPH57_03375
Enzymes [BR:
masy01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
DPH57_03375
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Paralog
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Motif
Pfam:
Complex1_51K
NADH_4Fe-4S
2Fe-2S_thioredx
SLBB
SLBB_2
Motif
Other DBs
NCBI-ProteinID:
AXA90293
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Position
752243..753952
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AA seq
569 aa
AA seq
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MNHPTIPIVVAQPDGKPAASRERKRQAPRGRRVEPDALAEVQALLGDAPRRRDLLIEHLH
RIQDRYGCLATRHLAALAQELRMAQAEVYEVASFYHHFDIVREGEAAPAALTVRVCAGLS
CEMAGASALLDKLPTLLGTNVRVLAAPCIGRCEQAPAALAGQRAVPRATTQAIAAAAAGT
TPPVSAHVGYDDYVAGGGYALLRDCVAGTRGAESLIAALEHAGLRGLGGAGFPAGRKWRI
VKAEAGPRLMAVNLDEGEPGTFKDRVYLERDPHRFIEGMLLAAWAVGIRDIYIYVRDEYH
DARALLAAELERLRVAAPVPGLPAIHLRRGAGAYICGEESAMIESIEGKRGMPRLRPPYV
AQVGLFGRPTLEHNFETLYWVRDIVQRGPDWFAGQGRHGRKGLRSYSVSGRVREPGVKLA
PAGITVRELIAEYCGGMAEGHTFYGYLPGGASGGILPAALGDVPLDFDTLQPYGCFIGSA
AVIVLSQQDSAVAAARNTMRFFRDESCGQCTPCRVGTAKALQLIEAPRWDTALLGELGQV
MRDASICGLGQAAPNPVDCVIRYFPQELA
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccacccgaccattcccatcgtcgtcgcccagccggacggcaagccggcggccagc
cgcgaacgcaagcgccaggccccgcgcgggcgccgggtcgagccggacgcgctggccgag
gtgcaggccttgctgggcgatgcgccgcgccggcgcgacctgctgatcgagcacctgcac
cgcatccaggatcgttacggctgcctggccacgcgccacctggccgcgctggcgcaggag
ctgcgcatggcgcaggcggaagtgtacgaggtggcctcgttctatcaccacttcgacatc
gtgcgcgaaggcgaggcggcacccgcggcgttgacggtgcgcgtctgcgccggcctgtcg
tgcgagatggccggcgccagcgcgctgctggacaagctgcccacgctgctgggaacgaac
gtgcgcgtgctggccgcaccctgcatcggccgctgcgagcaggccccggccgcgctggcc
gggcaacgggccgtgccccgcgccacgacccaggccatcgcggccgcggcagccgggacg
acgccacctgtgtcagcccacgtcggctacgacgactacgtggccggcggcggttacgcg
ctgctgcgcgactgcgtggccggcacccgcggcgccgagtcgctgatcgccgccctggag
cacgccggcctgcgcggcctgggcggcgccggtttcccggccgggcgcaaatggcgcatc
gtcaaggccgaggcgggcccgcgcctgatggccgtcaacctggacgagggcgagcccggc
acgttcaaggaccgcgtctacctggagcgcgatccgcaccgtttcatcgaaggcatgctg
ctggcggcatgggccgtgggcatccgcgacatttatatctacgtgcgcgacgaataccac
gacgcgcgcgcgctgctggcggccgaactggaacgcctgcgcgtggccgcgccggtgcct
ggcctgccggcgatccacctgcgccgcggcgccggcgcctacatctgcggcgaggagtcg
gcgatgatcgagtcgatcgaaggcaagcgcggcatgccgcgcctgcgcccgccctacgtg
gcccaggtcggcctgttcggccggcccacgctggagcacaatttcgagacgctgtactgg
gtgcgcgacatcgtccagcgcgggccggactggttcgccgggcagggccgccatggccgc
aagggcctgcgttcctattcggtgtcgggccgggtgcgcgaacccggcgtcaagctggcg
ccggccggcatcacggtgcgcgaactgatcgccgaatactgcggcggcatggcggaaggc
cacacgttctacggttacctgccgggcggcgcctcgggcggcatcctgcccgccgcgctg
ggcgacgtgccgctcgatttcgacaccctgcagccgtacggctgcttcatcggctcggcc
gccgtcatcgtgctgtcgcaacaggacagcgccgtcgcggccgcgcgcaacaccatgcgc
ttcttccgcgacgaatcgtgtggccagtgcacgccgtgccgggtcggcaccgccaaggcg
ctgcagctgatcgaggcgccgcgctgggatacggcgctgctgggcgaactggggcaggtg
atgcgcgacgcgtccatctgcggcctgggccaggcggcgccgaatccggttgactgcgtg
atccgctacttcccgcaggagctggcatga
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