Massilia sp. YMA4: DPH57_03620
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Entry
DPH57_03620 CDS
T05528
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
masy
Massilia sp. YMA4
Pathway
masy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
masy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DPH57_03620 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
masy03400
]
DPH57_03620 (recC)
Enzymes [BR:
masy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DPH57_03620 (recC)
DNA repair and recombination proteins [BR:
masy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DPH57_03620 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AXA90337
UniProt:
A0A7U5XVZ9
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All DBs
Position
808612..812037
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AA seq
1141 aa
AA seq
DB search
MTSPIAPGLLILHGNQLEQLRAAVFQWLRGHPLDPLETDILLVQSNGVAEWLKIAMAEEM
GVCAATRVALPARFLWQAYRAMLGRERVPRISAFDKGPLTWRLMRLLPALLADATFAPLR
HFLADGDPERRLQLAERLADLFDQYQVYRADWLADWAAGRDQMRCPRGVAHPLPEGQRWQ
AALWRAVVASVPEAERALGRASVHTEFVRAVEQGARPVAPLPRRVVLFGVSALPYQTLQA
LAALARFTQVIVAVPNPCRYYWGDIIDGRDLLRAARRRQQPRNGLDLAAVPLEELHAHSH
PLLASWGRQGRDYIRMLDEFDEASSSAGAGEHLRVDLFSEGDGDTLLRQLQGAVRDLLPL
AEHAFPPPEPDDRSIVFHVAHSVQREVEVLHDQLLTMFAADPTLRPRDVVVMVPDIDVFT
AAIRAVFGQYRRGRTALDARHIPFEIGDVNDRSVNPLLVALEWLLRLPQQRCRQSEVRDL
LDVPAVAARFGLAAQDLPILGQWIEGAGVRWGLDRRHREGLGLGPAGEQNAWIFGIRRML
LGYASGSGAAFGDIEPYGEVGGLDAALAGSLAQLVEQLLGWRAALAQPRTPLEWGEQARA
LLAAFFDAREEADRLTLNQLNDTLNAWLETCEGAGFDEPVPLSVLREAWLGALDEPSLEH
QFVSGGVTFCTLMPMRAVPFRVVCLLGMNDGDFPRRASRLDFDLLALPGMGRPGDRSRRD
DDRYLMLEAVLAARDTLYVSWCGRNVRDNSEQPPSVLVSQLMDYLKAGWRLPDLTDRTTE
HALQPFSRRYFEQGGLLTYAGEWRAAHNTGEDANEAGPDEDLALAPFEIDERFRLKLSML
AAFLRQPVRFFFRQRLGVVFAESALVGEDEEPFGLDGLQRYQLEDALLHDAGEDDVEDGE
KALASLLARAERLQREGVLPIGLIGDKVRDTLVQALLPVRQAWLRLRARYPHPANKLPVG
LVLDGVVLEDWIDQLRSDGEQTVWLLQMSSKALDKTGQPRGDKLIGMWLRQLAASAQGAA
YTGLLVARDAVVTMPPLAQDGARTVLAGLVTWWRHGMDGPLPVACRTALALVTGGDARAA
YDGGFDLDGEGADESLARLWPDYAALAAQPEHARVAQELYGPLAAWLKEHVGVQPIEGEG
A
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgacctctcccatcgcccccggcctcctgatcctgcacggcaaccagctcgagcagctg
cgcgccgccgtgttccaatggctgcgcggccacccgctcgacccgctggaaaccgacatc
ctgctggtgcagtcgaacggcgtggccgagtggctgaagatcgccatggccgaggaaatg
ggcgtgtgcgccgccacccgcgtggcgctgccggcgcgcttcctgtggcaggcctaccgt
gccatgctggggcgcgagcgggtgccgcgcatttccgccttcgacaagggccccttgacg
tggcgcctgatgcgcctgctgccggcgctgctggccgatgccacgttcgcgccgctgcgc
cacttcctggcggacggcgacccggaacgccggctgcaactggccgagcgcctggccgac
ctgttcgaccagtaccaggtgtaccgggccgactggctggccgactgggcggccgggcgc
gaccagatgcgctgcccgcgcggcgtggcccacccgctgccggaaggccagcgctggcag
gccgccttgtggcgcgccgtcgtcgccagcgtgccggaagcagagcgcgcgctgggccgt
gccagcgtgcacacggagttcgtgcgcgcggtggagcagggcgcgcggccggtggcgccg
ctgccgcgccgcgtggtgctgttcggcgtgtcggcgctgccgtaccagaccttgcaggcg
ctggcggcgctggcccgtttcacccaggtgatcgtggccgtgcccaatccctgccgctac
tactggggcgacatcattgacggccgcgacctgctgcgcgcggcgcgccggcgccagcag
cccaggaatggcctggacctggcggccgtgccgctggaggagctgcacgcgcacagccac
ccgctgctggcgagctggggccggcaggggcgcgactacatccgcatgctggacgaattc
gacgaagcatcgagcagcgcgggcgctggcgagcacctgcgcgtggacctgttcagcgaa
ggcgacggcgacaccttgctgcgccagttgcagggcgcggtgcgcgacctgctgccgctg
gcggaacacgcgttcccgccgcccgagccggacgaccgctcgatcgtgttccacgtcgcc
cacagcgtgcagcgcgaggtggaggtgctgcacgaccagctgctgacgatgttcgccgcc
gatcccaccctgcgcccgcgcgacgtggtggtgatggtaccggacatcgacgtcttcacg
gccgccatccgcgccgtgttcggccagtaccggcgcggccgcacggcgctggacgcgcgc
cacatcccgttcgagatcggcgacgtcaacgaccgcagcgtcaaccccctgctggtggcg
ctggaatggctgctgcgcctgccgcagcagcgctgccggcagagcgaggtgcgcgacctg
ctggacgtgccggccgtggcggcgcgcttcgggctggccgcgcaggacttgccgatcctg
gggcagtggatcgagggcgccggcgtgcgctggggtctggaccggcgccaccgcgaaggc
ctgggcctgggcccggccggcgagcagaacgcctggatcttcggcatccgccgcatgctg
ctgggctatgccagcggcagcggcgccgccttcggcgacatcgagccgtatggcgaagtg
ggcgggctcgatgcggcgctggccggctcgctggcccagctggtcgagcagttgctgggc
tggcgcgcggcgctggcgcagccgcgcacgccgctcgagtggggcgagcaggcgcgcgcg
ctgctggccgcgttcttcgatgcgcgcgaggaagccgaccgcctgaccctgaaccagctg
aacgacacgctgaacgcctggctggaaacctgcgaaggcgccggtttcgacgaaccggtg
ccactgtccgtgctgcgcgaagcctggctgggcgcgctggacgaaccgtcgctggaacac
cagttcgtctccggcggcgtcaccttctgcaccttgatgccgatgcgggcggtgccgttc
cgcgtggtgtgcctgttgggcatgaacgatggcgacttcccgcgccgcgccagccggctc
gacttcgacctgctggcgttgcccggcatgggtcgcccgggcgaccgctcgcgccgcgac
gacgaccgctacctgatgctggaagcggtgctggcggcgcgcgacacgctatatgtcagc
tggtgcggccgcaacgtgcgcgacaacagcgagcagccgccctcggtgctggtgagccag
ctgatggactacctgaaggccggctggcggctccccgatttgacggaccgtaccaccgag
cacgcgctgcagccgttctcgcggcgttacttcgagcagggcggactgctgacgtatgcg
ggcgaatggcgcgcggcccacaacaccggcgaggacgcgaacgaggccggtccggacgag
gacttggcgctggcgccattcgagatcgatgagcgcttccggctgaagctgtcgatgctg
gccgccttcctgcgccagccggtgcgcttcttcttccgccagcgcctgggggtggtgttt
gccgaatcggcgctggtgggcgaggacgaggagccgttcgggctcgatggcctgcagcgc
taccagctggaagacgcgctgctgcacgacgccggcgaagacgatgtggaggatggggaa
aaagccctggccagtctgctggcgcgcgctgaacgcctgcagcgcgagggcgtgctgccc
atcggcctgatcggcgacaaggtgcgcgacacgctggtgcaggcgctgctgccggtgcgc
caggcctggctgcggctgcgcgcccgctacccgcatccggccaacaagctgccggtcggc
ctggtgctggatggcgtggtgctggaggactggatcgaccagctgcgcagcgacggcgag
cagaccgtgtggctgctgcagatgtcgtcgaaagcgctcgacaagaccggccagccgcgc
ggcgacaagctgatcggcatgtggctgcgccagctggccgcgagcgcccagggcgcggcg
tacacgggcctgctggtggcgcgcgatgcggtggtgacgatgccgccgctggcgcaggac
ggcgcgcgcaccgtgctggccggcctggtgacgtggtggcgccacggcatggacggcccg
ctgccggtcgcatgccgtaccgcgctggccctggtcaccggcggcgacgcgcgcgccgcc
tacgacggcggcttcgaccttgacggcgagggcgccgacgaatccctggcgcgcctgtgg
ccggactatgccgcgctggcggcgcagccggagcacgcgcgcgtggcgcaggaactgtat
ggcccgctggcggcgtggctgaaggagcacgtcggcgtgcagccgatcgaaggagagggc
gcgtga
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