Massilia sp. YMA4: DPH57_04340
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Entry
DPH57_04340 CDS
T05528
Name
(GenBank) pseudouridylate synthase
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
masy
Massilia sp. YMA4
Brite
KEGG Orthology (KO) [BR:
masy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
masy03009
]
DPH57_04340
Enzymes [BR:
masy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
DPH57_04340
Ribosome biogenesis [BR:
masy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DPH57_04340
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
AXA94550
LinkDB
All DBs
Position
complement(978028..978744)
Genome browser
AA seq
238 aa
AA seq
DB search
MSELGLCSRREADEWIAKGWVRVDGKVVSELGTKVYPSQKVTVERQAAAEQSKRVTILIN
KPMGYVSGQAEDGYTPAVALIKPENRWADDPSPEQFHPTQLRSLVPAGRLDIDSVGLLVL
TQDGRIAKHLIGHDTEIDKEYLVRVQYTKPGKLPDADLKKLNYGLWMDGKPLLPAKVRWQ
NDDQLSFTLREGKKRQIRRMCEMVGLKVVGLKRVRIGKVKLGDLPTGQWRYLSPEERF
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaactgggcctgtgctcccgccgcgaggccgacgaatggatcgccaagggctgg
gtgcgggtcgacggcaaggtcgtgtccgagctgggcaccaaggtctacccgagccagaag
gtgacggtggaacggcaggccgccgccgaacagtccaagcgcgtgacgatcctgatcaac
aagccgatgggctacgtgtcgggccaggcggaggacggctacacgccggccgtcgccctg
atcaagccggaaaaccgctgggccgacgatccgtcgccggagcagttccatccgacccag
ctgcgcagcctggtgccggcggggcggctggacatcgattcggtgggccttttggtattg
acgcaggatggccgcatcgcgaaacacctgatcgggcacgacacggagatcgacaaggag
taccttgtacgagtgcagtacaccaagccgggcaagctgccggacgccgacctgaaaaaa
ctgaattatggcttgtggatggacggcaagccgctgctgccggccaaggtacgctggcaa
aacgacgaccagctcagtttcacgctgcgcgaggggaagaagcgccagatccggcgcatg
tgcgagatggtgggcctgaaagtggtcggcctgaagcgcgtgcgcatcggcaaggtcaag
ttgggcgacctgccgacgggccagtggcgttatctttctcccgaagaaagattctag
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