KEGG   Massilia sp. YMA4: DPH57_04650
Entry
DPH57_04650       CDS       T05528                                 
Symbol
clpV
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
masy  Massilia sp. YMA4
Pathway
masy03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:masy00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    DPH57_04650 (clpV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:masy02044]
    DPH57_04650 (clpV)
Secretion system [BR:masy02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   DPH57_04650 (clpV)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 NBD_SMAX1 AAA_16 Zeta_toxin Sigma54_activat Clp_N AAA_7 AAA_22 AAA_14 TniB nSTAND3 NACHT AAA_25 CbiA AAA_18 TSKS Hpr_kinase_C T2SSE
Other DBs
NCBI-ProteinID: AXA90524
LinkDB
Position
1043928..1046594
AA seq 888 aa
MADISRVALFGKLDALCYRAIDSSTVFCKLRGNPYVEVVHWVHQILQLQDSDLHRIVRHY
ELDGAGLARDLTAALDRLPRGATSVTDLSSHVEELVERAWVYGTLMFGEGAVRSGHLVVA
ALKTASLRNALFAISRQFERIKPDDLSERFASLLKESPEARMTASDGFVTAAPGEAAGAV
APAALGKQEALQKYTVDLTEQARGGKMDPIVGRDDEIRQMVDILMRRRQNNPIMIGEAGV
GKTAVVEGFAQRIARGDVPPALKEVRLLTLDVGLLQAGASMKGEFEQRLRAVIDEVQASE
KSIILFIDETHTLVGAGGAAGTGDAANLLKPALARGTLRTIGATTFAEYKKHIEKDPALT
RRFQSIQVDEPDEARAILMMRGVASTMEGHHKVQILDEALEAAVRLSHRYIPGRQLPDKS
VSLLDTASARVAVSLHATPAEVDDSRKRIDALTTELEIIRREDAIGIDTARRAAAAQAAL
DEEQGRLAALEARWQGERALVDELLALRARLRDGGRPVDGTDGDHERAGWREQLHGIQAR
LAALQGEQPLVLATVDYQAVAAVVGDWTGIPVGRMAKNELENILNIGTVLAQRVVGQDHA
MDMIAKRIQTSRAGLDNPGKPVGVFLLAGTSGVGKTETALALAEALYGGEQNLITINMSE
YQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEVEKAHPDVHEIFYQVFDK
GFMEDGEGRFIDFKNTLIILTTNAGTDLIAGLCKDPDLMPDPDGMAKALRPALLKVFPPA
LLGRLVTIPYYPLSDQMLGRIVRLQLERVKRRVEARYGIPFEYGDDVVQLVVSRCTESES
GGRMIDAILTNTLLPELSRRLLGAGAAAQAVRAIAVRAPGQAFEYELT
NT seq 2667 nt   +upstreamnt  +downstreamnt
atggccgacatcagccgggtcgcattgtttggcaagctcgatgcgttgtgctaccgcgcg
atcgacagcagcacggtattttgcaagctgcgcggcaatccctatgtggaggtggtccac
tgggtgcaccagatcctgcagctgcaggactcggacctgcaccgcatcgtgcgccactac
gaactcgatggcgccgggctggcgcgcgacctgacggcggcgctggaccggctgccgcgc
ggcgccacctccgtcaccgacctgtcctcgcacgtcgaggagctggtcgaacgtgcctgg
gtatacggcacgctgatgttcggcgaaggcgccgtgcgcagcggtcacctggtggtggcg
gcgctgaagaccgccagcctgcgcaatgccctgttcgcgatcagccgccagttcgagcgc
atcaagccggacgacctgtccgagcgcttcgccagcctgctgaaggagtcgccggaagcg
cgcatgacggcgagcgacggcttcgtcaccgccgcacccggcgaagccgccggtgccgtg
gcgccggccgcgctgggcaagcaggaagcgctgcaaaaatatacggtcgatctgaccgaa
caggcgcgcggcggcaagatggacccgatcgtcggccgcgacgacgagatccgccagatg
gtcgacatcctgatgcggcggcgccagaacaacccgatcatgatcggcgaggccggcgtc
ggcaagacggccgtggtggaaggcttcgcgcagcgcatcgcgcgcggcgacgtgccgccg
gcgctgaaggaggtgcgcctgctgacgctggacgtgggcctgctgcaggccggcgccagc
atgaaaggcgagttcgagcagcgcctgcgcgccgtcatcgacgaggtgcaggccagcgaa
aagtcgatcatcctgttcatcgacgagacccatacgctggtgggcgccggcggggcggcc
ggcacgggcgacgccgccaacctgctgaagccggcactggcgcgcggcaccctgcgcacc
atcggcgcgaccaccttcgctgaatacaagaagcatatcgagaaggacccggcgctgacg
cggcgcttccagagcatccaggtcgatgagccggacgaggcgcgcgccatcctgatgatg
cgcggcgtggcctcgacgatggaggggcatcacaaggtgcagatcctggacgaggcgctg
gaggcggccgtacggctgtcgcaccgctacattcccggccgccagctgccggataaatcc
gtcagcctgctcgacacggccagcgcgcgcgtggcggtcagcctgcatgccacgccggcc
gaggtggacgacagccgcaagcgcatcgacgcgctgacgacggagctggagatcatccgg
cgcgaggacgcgatcggcatcgacaccgcccggcgcgcagccgccgcgcaggccgcgctg
gacgaggaacagggccggctggcggcgcttgaggcgcgctggcagggcgagcgcgcactg
gtcgacgaattgctggcactgcgcgccaggctgcgcgatggcggcaggccggtcgacggc
acggatggcgaccatgaacgggccggctggcgcgagcagctgcacggcatccaggccagg
ctggcggcactgcagggcgaacagccgctggtgctggccaccgtggattaccaggccgtc
gccgccgtcgtgggcgactggaccggcattccggtcggccggatggcgaagaacgagctg
gagaacatcctcaacatcggcaccgtgctggcgcagcgggtagtgggccaggaccatgcg
atggacatgatcgccaagcgcatccagacgtcgcgcgcggggctggacaatcccggcaag
ccggttggcgtgttcctgctggccggcacgtccggcgtcggcaagacggagacggcgctg
gcgctggccgaggccctgtacggcggcgagcagaacctgatcaccatcaatatgagcgaa
taccaggaagcgcacacggtatcgaccctgaagggcgcgccaccgggctacgtcggctat
ggcgagggcggcgtgctgaccgaggcggtacggcgccggccgtactccgtggtgctgctg
gacgaggtggagaaggcgcaccccgacgtgcacgagatcttctaccaggtgttcgacaag
ggcttcatggaggacggcgaaggccgcttcatcgatttcaagaacacgctgatcatcctc
accaccaatgcgggcacggacctgatcgcggggctgtgcaaggacccggacctgatgccc
gacccggacgggatggccaaggcattgcggccggccctgctgaaggtgttcccgccggcg
ctgctgggacgcctggtgacgattccctactatccgctgtcggaccagatgctgggccgg
atcgtgcgcctgcagctggagcgcgtcaaacggcgggtcgaggcgcgctacggcatcccg
ttcgagtatggcgacgatgtggtgcaactggtggtgtcgcgttgcaccgagagcgagtcg
ggtgggcggatgatcgatgcgatcctgaccaacacgctgttgcctgagctgagccgcagg
ctgctcggtgccggtgcggcggcgcaggcggtgcgtgccatcgcggtgcgcgcgcccggg
caagctttcgagtacgagctgacatga

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