Massilia sp. YMA4: DPH57_04855
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Entry
DPH57_04855 CDS
T05528
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
masy
Massilia sp. YMA4
Pathway
masy00260
Glycine, serine and threonine metabolism
masy00460
Cyanoamino acid metabolism
masy00630
Glyoxylate and dicarboxylate metabolism
masy00670
One carbon pool by folate
masy00680
Methane metabolism
masy01100
Metabolic pathways
masy01110
Biosynthesis of secondary metabolites
masy01120
Microbial metabolism in diverse environments
masy01200
Carbon metabolism
masy01230
Biosynthesis of amino acids
masy01240
Biosynthesis of cofactors
masy04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
masy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DPH57_04855 (glyA)
09102 Energy metabolism
00680 Methane metabolism
DPH57_04855 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DPH57_04855 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DPH57_04855 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DPH57_04855 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DPH57_04855 (glyA)
Enzymes [BR:
masy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DPH57_04855 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AXA90561
UniProt:
A0A7U5XWA7
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Position
1102782..1104053
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AA seq
423 aa
AA seq
DB search
MFDRHHHTLAAIDPAIEAVIRRETLRQEEHIELIASENYTSPAVLAAVGSQLTNKYAEGY
PGKRYYGGCDIVDEAERLAIARLRSLFGAESVNVQPHSGSQANQAVFFAALKPGDTILGM
SLAEGGHLTHGMPLNISGKWFNVHSYGLNEAEEIDYDAMERTAHAVRPKMIIAGASAYSL
RIDFERFARVARDVGAYFMVDMAHYSGLIAGGQYPNPVPHADFVTSTTHKGLRGPRGGVI
LMKEQHEKAVNSAIFPGTQGGPLMHVIAGKAVAFKEALAPSFRLYQEQVLANAAAMAGAL
QQRGLRIVSNRTESHLMLVDLRGAGITGRDAERILGDVCITCNKNSIPNDPEKPVVTSGI
RLGSPAITTRGFGVAEARLVGNLVADVLQAPTDAPTLARVHEQVRALCRDFPVYGPVHGP
VHG
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatcgtcaccaccacaccctagccgccatcgatcccgcgatcgaggccgtcatc
cggcgcgaaacgctgcgccaggaggaacacatcgaactcatcgcatcggagaactacacg
tcgccggccgtgctggccgccgtgggatctcagctcaccaacaagtatgcggaaggctat
ccgggcaagcgctactacggcggctgcgacatcgtcgacgaggcggagcgcctggccatc
gcgcgcctgcgcagcctgttcggcgccgagagcgtcaatgtgcagccgcactccggttcg
caggcgaaccaggcggtgttctttgccgccctgaagccgggcgacaccatcctcggcatg
agcctggccgaaggcggccacctgacgcacggcatgccgctcaatatcagcggcaagtgg
ttcaacgtgcacagctatggcctgaacgaagccgaggaaatcgactacgacgccatggag
cgcacggcgcacgcggtgcgcccgaagatgatcatcgccggtgcttcggcgtactcgctg
cgcatcgatttcgagcgcttcgcccgggtggcgcgcgatgtcggcgcctacttcatggtg
gacatggcgcattactccggcctgatcgccggcggccagtacccgaacccggtgccgcat
gcggacttcgtcacgtccaccacccacaagggcctgcgcgggccgcgcggcggtgtgatc
ctgatgaaggagcagcacgagaaggccgtcaactcggccatcttcccgggcacgcagggc
gggccgctgatgcacgtgatcgccggcaaggccgtggcgttcaaggaagcgctggcgccg
tcgttccggctgtaccaggagcaggtgctggccaacgcggccgcgatggccggggccttg
cagcagcgtggcctgcgcatcgtatcgaaccgcaccgagagccacctgatgctggtggac
ctgcgcggcgccggcatcacgggccgcgacgccgagcgcatcctgggcgacgtctgcatc
acctgcaacaagaactcgatcccgaacgatccggaaaagccggtcgtgaccagcggcatc
cgcctgggcagcccggccatcaccacgcgcggcttcggcgtggccgaggcgcgcctggtc
ggcaacctggtggcggacgtgctgcaggcacccaccgacgccccgacgctggcgcgcgtg
cacgagcaggtgcgggccctgtgccgcgacttcccggtgtatggccccgttcatggcccc
gttcatggctga
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