Massilia sp. YMA4: DPH57_04975
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Entry
DPH57_04975 CDS
T05528
Name
(GenBank) Y4yA family PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
masy
Massilia sp. YMA4
Pathway
masy00300
Lysine biosynthesis
masy00470
D-Amino acid metabolism
masy01100
Metabolic pathways
masy01110
Biosynthesis of secondary metabolites
masy01120
Microbial metabolism in diverse environments
masy01230
Biosynthesis of amino acids
Module
masy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
masy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DPH57_04975
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DPH57_04975
Enzymes [BR:
masy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DPH57_04975
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AXA90582
UniProt:
A0A7U5XWC4
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All DBs
Position
1133743..1135107
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AA seq
454 aa
AA seq
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MQKPLVALLDQAVAALLHAEPRQLVALVEQHGSPLNVVWPHILRQNVEALRAVLRAHDVR
HEIFYGAKVNKSQALVRAAVQADAGVDVSSVYELRDALRAGVDPARVVATGPAKTRVFHA
ELLACGALISVDSCEELAALEAALAGPARARALARVLLRYRPESNRNSRFGMDATALQHC
LQRLAALRGAVTFEGFHCHLGGYAWETRVQAIRELAASVAAARELDLPPRMLDIGGGLPV
RYVDGDAYDEFLPAQEPADYRTGRVPTSYYPYGGRTDAATWLHNVLAAPIGDGRTVAQYL
NAERLVLALEPGRSLVDQAAVTAFRVTQVKALADGKHVVFVEGSSFSACETWFGSEFLVD
PVLLPADPERAEDGAPCAAQFAAYIAGHSCLDDDVITNRILDFDRRPAPGDLLVYANTAG
YQMDLLENEFHRHPMPRRIVVHVNARGAMEFSPD
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagcccctggtagcgctgctggaccaggccgtggcggcgttgctgcatgccgag
ccacgccagctggtagccctggtcgagcagcacggttcaccgctgaacgtggtctggccc
cacatcctgcgccagaacgtcgaggcgctgcgcgccgtgctgcgcgcgcacgacgtgcgc
cacgaaatcttttacggcgccaaggtcaacaagtcgcaagcgctggtgcgcgcggcggtg
caggccgatgccggcgtggacgtctccagcgtgtacgaattgcgcgacgcgctgcgcgcc
ggcgtggacccggcccgcgtggtcgccactggcccggccaagacgcgcgtcttccatgcc
gagctgctggcgtgcggcgcgctgatctcggtcgattcgtgcgaggagctcgccgcgctg
gaagcggcgctggcgggaccggcgcgtgcccgtgcccttgcccgtgtactgctgcgctac
cggccggagtccaaccgcaacagccgcttcggcatggacgcaacggcgctccagcactgc
ctgcaacgcctggcggccctgcgcggtgccgtcacgttcgaaggcttccactgccacctg
ggcggctacgcttgggaaacgcgcgtgcaggccatccgcgagctggccgccagcgtggcg
gcggcgcgcgaactggacctgccgccgcgcatgctcgacatcggcggcggcctgccggtg
cgctacgtggatggcgacgcctatgacgaattcctgccggcgcaggagccggccgactac
cgtaccggccgcgtgccgacttcgtactacccgtacggtggccgtactgacgcggccacc
tggctccacaacgtgctggcggcgccgatcggcgacggccggacggtggcgcaatacctg
aacgccgagcggctggtgctggcgctggaaccgggccgcagcctggtggaccaggccgcc
gtgacggcgttccgcgtcacgcaggtgaaggcgctggccgacggcaagcacgtcgtcttc
gtcgaaggcagcagcttcagcgcttgcgagacctggttcggttccgagttcctggtcgat
ccggtcctgctgccggccgatccggagcgtgcggaggatggcgctccttgtgccgcgcag
tttgcagcctacatcgccggccacagctgcctggacgacgacgtcatcaccaaccggatc
ctcgacttcgaccggcgccccgcgcccggcgacctgctggtgtacgccaacacggccggc
taccagatggacctgctcgaaaacgaattccaccgccatccgatgccgcgccggatcgtg
gtgcatgtcaacgcgcgcggcgccatggagttctcacccgactag
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