KEGG   Massilia sp. YMA4: DPH57_06955
Entry
DPH57_06955       CDS       T05528                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
masy  Massilia sp. YMA4
Brite
KEGG Orthology (KO) [BR:masy00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:masy02044]
    DPH57_06955 (tssC)
Secretion system [BR:masy02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   DPH57_06955 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: AXA90925
LinkDB
Position
complement(1626305..1627795)
AA seq 496 aa
MSAQATQAGAAAVTTTTEAGLLDQIVEQSKVAKSSAEHARAKDLISELVSQVMDGTVVVS
DNLAATIDARVAELDRLISAQLSAIMHAPEFQKLESSWTGLNYLVRNSSTGQNLKIKMLN
ATKRELVKDFQSALEFDQSTMFKKVYEEEFGTFGGAPFGALLGDFEITRQPEDMYFIEQM
SHVAAAAHAPFITSASPELFGLESYSELGKPRDLSKIFDTVEYAKWKSFRESEDSRYVGL
TLPRFLGRLPFNPADGATTEGFNFVEDVDGTDHHKYLWCNAAYAFGTKLTAAFEDYGWCA
AIRGVEGGGLVEDLPTHTFKTDEGEVALKCPTEIAITDRREKELSDLGFISLVHCKNTDY
AAFFGAQSAQKPRKYNNEAANANAVLSAQLQYIFAVSRIAHYMKAMMRDKIGSFAAASNV
EDFLNRWLTQYVLLDDNASQEQKAQFPLREASVQVSEVPGRPGVYRAVSFLRPHFQLDEL
SVSLRLVAELPASTKT
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgtccgcacaagccactcaagccggcgcagccgccgttaccaccaccaccgaagctggc
ctgcttgaccagatcgtcgagcagagcaaggtcgccaagtccagcgccgagcacgcccgc
gccaaggacctgatctccgaactggtcagccaggtcatggacggcaccgtcgtcgtctcc
gacaacctggccgccaccatcgacgcccgcgtcgccgagctcgatcgcctgatttcggca
cagctgtcggccatcatgcacgcgcccgagttccagaagctggagagcagctggacgggc
ctgaactacctggtgcgcaacagctccaccggccagaacctgaagatcaagatgctcaac
gcgaccaagcgcgaactggtgaaggacttccagagcgcgctggagttcgaccagagcacg
atgttcaagaaggtctacgaggaggaattcggcaccttcggcggcgccccgttcggcgcg
ctgctgggcgacttcgagatcacccgccagccggaagacatgtatttcatcgaacagatg
tcgcacgtggccgccgccgcgcacgcgccgttcatcacgtccgcgtcgcccgagctgttc
ggcctggagagctattccgaactgggcaagccgcgcgacctgtcgaagatcttcgacacc
gtcgaatacgccaagtggaagtcgttccgcgaatccgaggactcgcgctatgtgggcctg
accctgccgcgcttcctgggccgcctgccgttcaatccggccgatggcgccaccacggaa
ggcttcaacttcgtcgaggacgtggacggcaccgaccaccacaaatacctgtggtgtaac
gccgcctacgcgttcggcaccaagctgacggccgcgttcgaggactacggctggtgcgca
gccatccgcggtgtcgaaggtggcggcctggtcgaggacctgccgacccataccttcaag
accgacgaaggcgaggtcgcgctgaagtgcccgaccgagatcgccatcaccgaccgccgc
gagaaggaactgtccgacctgggcttcatctcgctggtccactgcaagaacaccgactat
gcggcgttcttcggcgcgcagtcggcgcagaagccgcgcaagtacaacaacgaagctgcc
aacgccaacgccgtgctgtcggcccagctgcaatacatcttcgccgtatcgcgcatcgcg
cactacatgaaggccatgatgcgcgacaagatcggcagctttgccgccgcgtcgaacgtc
gaggacttcctgaaccgctggctgacgcagtacgtgctgctggacgataacgccagccag
gaacagaaggcccagttcccgctgcgcgaagcgtccgtgcaagtttccgaagtgccgggc
cgcccgggcgtgtaccgcgccgtgtcgttcctgcgtccgcacttccagctcgacgagctg
tccgtttccctccgtttggtcgcggagcttccagcatcgaccaaaacttaa

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