Massilia sp. YMA4: DPH57_08300
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Entry
DPH57_08300 CDS
T05528
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
masy
Massilia sp. YMA4
Pathway
masy00040
Pentose and glucuronate interconversions
masy01100
Metabolic pathways
masy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
masy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
DPH57_08300
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DPH57_08300
Enzymes [BR:
masy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
DPH57_08300
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
AXA91160
UniProt:
A0A7U6B3I8
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All DBs
Position
complement(1969014..1970429)
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AA seq
471 aa
AA seq
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MASKRIISANVVALLFAGTAQAADWPSGYSKCADQDGTCKVGGTARSVSFGIKDKFVVKT
LSGDVACTVATFGSDPYPGVTKKCAIGPVSGTTPTPTPTPTPQPVGDASVEPAPATGWAS
RNGGTTGGAAAGSTAIYKVSSPSQLLAALKAQGNNPKIIKLYGTVDMAAADNGGPFKSTS
DQALRSQIKVGSNTTLIGTGGDTRLVNGTISISGVQNVIVRNLNIVNPCDVAPVWDPNDG
SSGNWNSEFDSVVISNSKNVWVDHNVFTDAPLTDDKLPIANGKIKQCHDGALDVKNGSDH
VTVSNNRFELHTKNNLIGSSDSTTSDNGHLTVTFNGNHFLHVAERAPRVRFGMVHLYNNY
FEGSRSHAVYPHHYSIGVAYLAKIISQNNAFDIAGASSCPQIMTNPGSSSKTGAIVDSGS
LLNGAALDVANKCSFSSSVGWTVPYSVTPLAASAVRQSVLSNAGTGKLTVR
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
ttggcatccaaacggattatttcggccaatgtggtagcgctacttttcgccggcactgcg
caggcggcggactggccttccggttactcgaaatgcgccgaccaggacggcacctgcaag
gtgggcggcacggcccgttccgtgtcgttcggcatcaaggacaagttcgtggtcaagacg
ttgtccggcgacgtggcctgcacggtggcgacgttcggcagcgatccctatccgggcgtg
acgaaaaaatgcgcgatcggtcctgtgagcggtaccacgccaacgccgaccccgacccca
actccgcagccggtgggcgacgccagcgtcgagccggcgcccgcaaccggctgggccagc
cgcaacggcggcacgacgggcggcgcggcagccggatcgacggccatctacaaggtcagc
tcgccgtcgcaactgctggcggcgttgaaggcgcagggcaacaatccgaagatcatcaag
ctgtacggtaccgtcgacatggcagcggccgacaacggcggcccgttcaagagcaccagc
gaccaggcgctgcgcagccagatcaaggtgggcagcaacaccaccttgatcggcaccggc
ggcgacacgcgcctcgtcaacggcacgatctcgatctcgggcgtgcagaacgtcatcgtg
cgcaacctgaacatcgtcaacccgtgcgacgtggcaccggtgtgggacccgaacgacggc
agcagcggcaactggaactcggagttcgacagtgtcgtcatcagcaattcgaagaacgtc
tgggtcgaccacaatgtgttcacggacgcgccgctgacggacgacaagctgcctatcgcc
aacggcaagatcaagcagtgccatgacggcgcgctggacgtgaagaacggctcggaccac
gtgacggtgtcgaacaaccgcttcgaactgcacacgaagaacaacctgatcggctcctcc
gacagcaccacgagcgacaacggccacctgaccgtcaccttcaacggcaaccacttcctg
cacgtggcggagcgcgcgccgcgggtgcgcttcggcatggtccacctctacaacaactac
ttcgagggcagccgctcgcacgccgtctatccgcaccactacagcatcggcgtggcctac
ctggccaagatcatctcgcagaataacgcgttcgacatcgccggcgccagttcctgcccg
cagatcatgaccaacccgggctcgtcgagcaagaccggggcgatcgtcgattccggctcg
ctgctgaacggcgcggcgctggacgtggcgaacaagtgcagcttcagctcgtcggtgggc
tggacggtgccctactcggtcacgccgctggccgcgtcggccgtccggcagtcggtgctg
agcaatgccggtactggcaagctgacggtgcgctaa
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