Massilia sp. YMA4: DPH57_09035
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Entry
DPH57_09035 CDS
T05528
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
masy
Massilia sp. YMA4
Pathway
masy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
masy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DPH57_09035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
masy03021
]
DPH57_09035
Transcription machinery [BR:
masy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DPH57_09035
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
PhyR_sigma-like
Sigma70_ECF
Phage_terminase
HTH_24
HTH_28
HTH_11
HTH_Mga
MerR
Rv2175c_wHTH
YceM-like_C
HTH_AsnC-type
HTH_23
PCI
Motif
Other DBs
NCBI-ProteinID:
AXA91282
LinkDB
All DBs
Position
2132397..2132900
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AA seq
167 aa
AA seq
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MTLAPTLLRQQFLHHEFRHSYGWLTASMHRLTGSRHDAEDLAASAFTELVALDDVSQVRQ
PRALLTTIARRLTFELWRRRDLERAHLAELAQRPECHAPSAQDVCLGVEEVARIDAALNR
LGPRVRTAFLLSQYDELAYADIAARLGVSASMVRKYVAQARTACLVA
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgactctcgccccaacgctacttcgccagcaattcctgcatcatgaattccgccacagc
tacggctggctgaccgccagcatgcaccgcctgaccggctcgcgccacgacgccgaggac
ctggccgcatcggccttcacggagctggtcgcgctggacgacgtcagccaggtgcgccag
ccgcgcgcgctgttgacgaccatcgcgcgccgcctcacgttcgagctgtggcgccggcgc
gacctggaacgcgcccacctggccgagctggcgcaacgccccgaatgccacgcgccatcg
gcacaggacgtctgcctgggcgtcgaggaggtcgcccgcatcgacgccgcgctgaaccgg
ctcggcccgcgcgtgcgcaccgcgttcctcctgagccagtacgacgaactggcctatgcc
gacatcgccgcacggctgggcgtctccgccagcatggtgcgcaagtacgtggcgcaggca
cggaccgcctgccttgttgcctga
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