Massilia sp. YMA4: DPH57_09995
Help
Entry
DPH57_09995 CDS
T05528
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
masy
Massilia sp. YMA4
Pathway
masy00220
Arginine biosynthesis
masy00240
Pyrimidine metabolism
masy00250
Alanine, aspartate and glutamate metabolism
masy01100
Metabolic pathways
masy01110
Biosynthesis of secondary metabolites
masy01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
masy00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
DPH57_09995 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
DPH57_09995 (carB)
00220 Arginine biosynthesis
DPH57_09995 (carB)
Enzymes [BR:
masy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
DPH57_09995 (carB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATP-grasp_4
ATPgrasp_Ter
ATP-grasp_5
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
AXA91453
UniProt:
A0A7U5XXZ4
LinkDB
All DBs
Position
complement(2363735..2366965)
Genome browser
AA seq
1076 aa
AA seq
DB search
MPKRLDIKSILIIGSGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEM
ADVTYIEPITWQVVERILDKERPDAILPTMGGQTALNCALDLHRHGILEKYNVELIGATP
EAIDKAEDRAKFKDAMTKIGLGSARSGIAHSMDEAWSVQRELGFPTIIRPSFTMGGSGGG
IAYNEEEFEQICKRGLEASPTSELLIEESLLGWKEYEMEVVRDKADNCIIICSIENLDPM
GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSINPKDGRMIVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNEITGGATPASFEPSIDYVVTKIP
RFAFEKFPTADHHLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDGLNQKTVDREKLE
EELGEPGPERIWYVGDAFAQGFTLEEVHQLTKIDPWFLVQIKEIVDLELWLDTQKLDNLD
KNTLYRLKQKGFSDRRLAYLLQTTDTEVRKRRRELGIRPVYKRVDTCAAEFATNTAYMYS
TYDEECESNPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCNPETV
STDYDTSDRLYFESLTLEDVLEIVDLEKPVGVIVQYGGQTPLKLALDLEKNGVPIVGTSP
DMIDAAEDRERFQKLLHDLNLRQPPNRTARTEEEALRLAQEIGYPLVVRPSYVLGGRAME
IVHEQRDLERYMREAVKVSNDSPVLLDRFLNDAIECDVDCISDGETTFIGGVMEHIEQAG
VHSGDSACSLPPYSLAQDTIDELKRQTALMAKGLNVVGLMNVQFAIQKQDVDGVQKDVVY
VLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQTLAQQGITREVVPPYYSVKEAVFPFV
KFPGVDTILGPEMKSTGEVMGVGQTFAEAFVKSQLGAGVKLPKSGKVFLSVKGSDKPRAV
KVARDLVDAGFTLVATKGTAAVIAAAGLPVTPVNKVVEGRPHVVDMIKNHEIALVINTVE
EKRSAINDSRTIRTSSLQSRVTTFTTIAGAEAAVAGIRHLDELQVYDLQGLHKTLH
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtttagacatcaaaagcatcctgattatcggctccggcccgatcgtgatc
ggccaggcctgcgaattcgactattccggcgcccaggcctgcaaggccctgcgcgaagag
ggttataaggtcatcctggtcaacagcaatccggccacgatcatgaccgacccggaaatg
gccgacgtcacctatatcgagccgatcacctggcaggtggtcgagcgtatcctggacaag
gagcgtccggacgcgatcctgccgacgatgggcggccagaccgcgctgaactgcgcgctc
gacctgcaccgccacggcatcctggagaagtacaacgtcgaactgatcggcgccacgccg
gaagcgatcgacaaggccgaggaccgcgccaagttcaaggacgcgatgaccaagatcggc
ctgggttcggcccgttccggcatcgcccactcgatggacgaagcgtggagcgtgcagcgc
gagctgggcttcccgaccatcatccggccgtcgttcacgatgggcggctcgggcggcggc
atcgcctacaacgaggaagagttcgagcagatctgcaagcgcggcctggaagcctcgccc
acgtccgagctgctgatcgaagagtcgctgttgggctggaaagagtacgagatggaagtg
gtgcgcgacaaggcggacaactgcatcatcatctgctcgatcgagaacctggacccgatg
ggcgtgcacaccggcgactcgatcactgtggcgccggcacagacgctgacggacaaggaa
taccagatcatgcgtaacgcgtcgctggcggtgctgcgcgagatcggcgtggacacgggc
ggctcgaatgtgcaattctcgatcaatccgaaggacggccgcatgatcgtcatcgagatg
aacccgcgcgtgtcgcgttcgtcggcgctggcgtcgaaagccaccggcttcccgatcgcg
aaagtggcggccaagctggccgtgggcttcacgctggacgagctgcgcaacgagatcacg
ggtggcgccacgccggcatcgttcgagccgtcgatcgactatgtcgtcaccaagatcccg
cgcttcgcgttcgagaagttcccgaccgccgaccaccacctgaccacgcagatgaaatcc
gtgggcgaggtgatggcgatgggccgcaccttccaggaatcgttccagaaggcgctgcgc
ggcctggaagtgggcgtcgatggcctgaaccagaagacggtcgaccgcgagaagctggaa
gaggaactgggcgagccgggtccggagcgcatctggtacgtgggcgacgccttcgcccag
ggcttcacgctggaggaagtgcaccagctgaccaagatcgacccgtggttcctggtgcag
atcaaggagatcgtcgacctggaactgtggctggacacgcagaagctcgataacctggac
aagaacacgctgtaccgcctgaagcagaagggcttctcggaccgccgcctggcctacctg
ctgcagacgaccgacaccgaggtgcgcaagcgccgccgcgaactgggcatccgcccggtg
tacaagcgcgtcgacacctgcgcggccgaattcgccaccaacacggcctacatgtactcc
acgtatgacgaggagtgcgagtccaacccgaccgacaagaagaagatcatggtgctgggc
ggtggcccgaaccggatcggccagggcatcgagttcgactactgctgcgtgcacgcggca
ctggcgatgcgcgaggacggctacgagaccatcatggtcaactgcaatccggaaaccgtg
tcgaccgattacgacacctccgaccgcctgtatttcgaatcgctgaccctggaggacgtg
ctggagatcgtcgacctggagaagccggtcggggtgatcgtgcagtacggcggccagacg
ccgctgaagctggcgctggacctggaaaagaacggcgtgccgatcgtcggcacgtcgccg
gacatgatcgacgcggccgaagaccgcgagcgcttccagaagctgctgcacgacctgaac
ctgcgccagccgccgaaccgcaccgcccgtaccgaagaagaagcactgcgcctggcgcag
gaaatcggctacccgctggtggtgcgtccttcctacgtgctgggcggccgcgcgatggag
atcgtgcacgagcagcgcgacctggagcgctacatgcgtgaggcggtcaaggtatcgaac
gattcgccggtgctgctggaccgcttcctgaacgacgcgatcgaatgcgacgtggactgc
atctcggacggcgagaccaccttcatcggcggcgtgatggagcacatcgagcaggccggc
gtgcactcgggcgactccgcctgctcgctgccgccatactcgctggcgcaggacactatc
gatgaactgaagcgccagaccgcgctgatggccaagggcctgaacgtggtgggcctgatg
aacgtgcagttcgcgatccagaagcaggacgtggacggcgtgcagaaggacgtcgtgtac
gtgctggaagtgaacccgcgcgcctcgcgcacggtgccgttcgtgtcgaaggccaccggc
ctgcagctggccaagatcgcggcgcgctgcatggtcggccagaccctggcgcagcaaggc
atcacgcgggaagtggtgccgccttactacagcgtcaaggaagccgtgttcccgttcgtg
aagttcccgggtgtcgacacgatcctgggccccgagatgaaatcgacgggcgaggtgatg
ggcgtgggccagacgttcgccgaggcgttcgtcaagtcgcagctgggcgccggcgtcaag
ctgccgaagtcgggcaaggtgttcctgtcggtgaagggttcggacaagccgcgcgcggtg
aaggtggcgcgcgacctggtcgatgccggcttcacgctggtggcgaccaagggcacggcg
gccgtgatcgcggcggcgggcctgcccgtcacgccggtcaacaaggtcgtcgagggccgc
ccgcacgtggtggacatgatcaagaaccacgagatcgccctggtcatcaacacggtggaa
gagaaacgcagtgcgatcaacgactcgcgtacaatccgtacgtcgtcgttgcagtcgcgc
gtgacgacgtttacgacgatcgccggcgcggaagccgcggtcgccggcatccgccacctg
gacgagttgcaggtgtacgatttacaaggtctgcataaaacactacactaa
DBGET
integrated database retrieval system
