Massilia sp. YMA4: DPH57_10110
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Entry
DPH57_10110 CDS
T05528
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
masy
Massilia sp. YMA4
Brite
KEGG Orthology (KO) [BR:
masy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
masy03400
]
DPH57_10110
DNA repair and recombination proteins [BR:
masy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DPH57_10110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DUF7125
DnaB_C
AAA_22
GvpD_P-loop
ChlI
AAA_16
Lon_C
AAA_24
SLFN-g3_helicase
Rad51
nSTAND3
AAA_14
nSTAND_NTPase5
AAA
RecA_N
AAA_5
ABC_tran
CobU
NTPase_1
Zeta_toxin
MCM
AAA_29
zf-C3HC4_3
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
AXA91471
LinkDB
All DBs
Position
complement(2389374..2390750)
Genome browser
AA seq
458 aa
AA seq
DB search
MAKAKTNYTCSECGGTSTKWTGQCPACRQWNTMVETVVETAGVNRFSQGQHQALAQTAPV
LSLHEIEALDVPRFGTGIDEFDRVLGGGLVAGGVVLIGGDPGIGKSTLLLQALAEMSRLR
SVLYVSGEESGAQIALRAKRLAIDARDFKLQAEIQLEKILGTLADVRPQVAVIDSIQTLY
SDALTSAPGSVAQVRECAAQLTRVAKQTGVTIILVGHVTKEGALAGPRVLEHIVDTVLYF
EGDSHSSFRLVRAIKNRFGAVNELGVFAMTEKGLKGVSNPSALFLSQHDNQVPGSCVMVT
QEGTRPLLVEIQALVDASHLPNARRLSVGLEQNRLAMLLAVLHRHAGIAAFDQDVFINAV
GGVKITEPAADLAVLLAINSSMRNKALPRGFVVFGEVGLAGEIRPAPRGQERLREAAKLG
FSIAMIPKANAPKQPIEGMTIIAVDRIDDAFNRLRELQ
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcaaagaccaactacacctgcagcgaatgcggcggcaccagcaccaaatgg
acgggccagtgcccggcgtgccggcagtggaacacgatggtggaaaccgtcgtcgagacg
gccggcgtaaaccgcttctcgcagggccagcaccaggcgctggcgcagacggcgccggtg
ctgtcgctgcacgagatcgaggcgctcgacgtgccccgtttcggcacgggcatcgatgaa
ttcgaccgcgtgctgggcggtggcctggtggccggcggcgtcgtgctgatcggcggcgac
cccggcatcggcaaatccaccctgctgctgcaggcgctggccgagatgtcgcgcctgcgc
agcgtgctgtacgtgtcgggcgaggagtcgggcgcgcagatcgcgctgcgcgccaagcgc
ctggccatcgacgccagggatttcaaactgcaggccgagatccagctggaaaagatcctc
ggcacgctggcggacgtgcggccgcaggtggccgtgatcgactcgatccagaccctgtat
tcggacgcgctgacgtccgcgccgggctcggtggcgcaggtgcgcgaatgcgcggcgcag
ctgacgcgcgtggccaagcagaccggcgtgacgatcatcctggtcggccacgtgacgaag
gagggcgcgctggccgggccgcgcgtgctcgagcacatcgtcgacacggtgctgtacttc
gagggcgacagccactccagcttccgcctggtgcgcgccatcaagaaccgcttcggcgcc
gtcaacgagctgggcgtgttcgcgatgacggagaagggcctgaagggcgtctcgaatccg
tccgcgctgttcctgtcgcagcacgacaaccaggtgcccggttcctgcgtgatggtcacg
caggaaggcacccggccgctgctggtggagatccaggcgctggtcgacgccagccatctg
cccaatgcgcgccgcctgtccgtcggcctggagcagaaccggctggcgatgctgctggcc
gtattgcaccggcatgccggcatcgccgcgttcgaccaggacgtgttcatcaacgcggtg
ggcggcgtcaagatcacggagccggcggccgacctggcggtgctgctggcgatcaactca
tcgatgcgcaacaaggcgctgccacgcggcttcgtggtgttcggcgaggtgggcctggcc
ggcgagatccggccggcgccgcgcgggcaggagcgtttgcgcgaggccgccaagctgggc
ttttccatcgccatgatcccgaaggccaacgcgcccaagcagccgatcgagggcatgacg
atcattgccgtcgaccggatcgacgacgctttcaatcgcttgcgcgagctgcagtga
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