Massilia sp. YMA4: DPH57_10555
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Entry
DPH57_10555 CDS
T05528
Symbol
cydB
Name
(GenBank) cytochrome d ubiquinol oxidase subunit II
KO
K00426
cytochrome bd ubiquinol oxidase subunit II [EC:
7.1.1.7
]
Organism
masy
Massilia sp. YMA4
Pathway
masy00190
Oxidative phosphorylation
masy01100
Metabolic pathways
masy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
masy00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
DPH57_10555 (cydB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DPH57_10555 (cydB)
Enzymes [BR:
masy01000
]
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.7 quinol oxidase (electrogenic, proton-motive force generating)
DPH57_10555 (cydB)
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Motif
Pfam:
Cyt_bd_oxida_II
Motif
Other DBs
NCBI-ProteinID:
AXA91553
UniProt:
A0A7U5XY63
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All DBs
Position
complement(2490851..2491858)
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AA seq
335 aa
AA seq
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MDVDITVIWAAIVFFGVFMYVVMDGFDLGIGMLYPFVPARADRDVMMNTVAPVWDGNETW
LVLGGAGLLAAFPVAYSIVLSGLYLPLIFMLLGLLFRGVAFEFRFKARERERHVWDKAFI
GGSLVAAFFQGVALGAFLSGIPVSGRSFSGTALGWLSPFALAAGCGTMIAYTLLGATWLV
MKTDGPLQQRMLRLARPLTFLMLAAIVTVSIWTPLRYPQVAERWFSFPNMALLAPVPALV
LLAVFLLLRSLSRNPHRLPFLMALALVFLAYAGMAISIWPHIVPPYITIWEAAAPPSSQR
FALVGTLCILPFILIYTAWSYFVFRGKVKAGEGYH
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgacatcaccgtgatctgggccgccatcgtcttcttcggcgtgttcatgtac
gtcgtcatggacggcttcgacctgggcatcggcatgctgtacccgttcgtgccggcgcgg
gccgaccgcgacgtgatgatgaacaccgtggcgcccgtgtgggacggcaacgagacctgg
ctggtgctgggcggcgcgggtttgctggcggcctttccggtggcgtattcgatcgtgctg
tccggcctgtacctgccgctgatcttcatgctgctgggattgctgtttcgcggcgtcgcg
ttcgagttccgcttcaaggcgcgcgagcgcgagcgccacgtctgggacaaggccttcatc
ggcggctcgctggtggccgcgttcttccagggcgtcgcgctgggtgccttcctgagcggc
attccggtctccggccgcagcttcagcggcacggcgctgggctggctgtcgccgttcgcg
ctggccgccggctgcggcacgatgatagcctacacgctgctgggcgccacctggctggtc
atgaagacggacgggccgttgcagcagcgcatgctgcgcctggcgcggccgctgacattc
ctgatgctggcagccatcgtcacggtcagcatctggacgccgctgcgctacccgcaggtg
gccgagcgctggttcagcttccccaatatggcgctgctcgcgccggtaccggcgctggtg
ctgctggccgtgttcctgctgctgcgctccctgtcgcgcaacccgcaccggctgcccttc
ctgatggcgctggcgctggtgttcctggcctacgcgggcatggcgatcagcatctggcca
cacatcgtgccgccctacatcacgatctgggaagcggcggcaccgccatcgagccagcgc
ttcgcgctggtcggcacgctgtgcatcctgccgttcatcctgatatataccgcctggtcg
tacttcgtcttccgcggcaaggtcaaggcgggcgagggctaccactga
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