Massilia sp. YMA4: DPH57_11480
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Entry
DPH57_11480 CDS
T05528
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
masy
Massilia sp. YMA4
Pathway
masy00260
Glycine, serine and threonine metabolism
masy00460
Cyanoamino acid metabolism
masy00630
Glyoxylate and dicarboxylate metabolism
masy00670
One carbon pool by folate
masy00680
Methane metabolism
masy01100
Metabolic pathways
masy01110
Biosynthesis of secondary metabolites
masy01120
Microbial metabolism in diverse environments
masy01200
Carbon metabolism
masy01230
Biosynthesis of amino acids
masy01240
Biosynthesis of cofactors
masy04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
masy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DPH57_11480 (glyA)
09102 Energy metabolism
00680 Methane metabolism
DPH57_11480 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DPH57_11480 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DPH57_11480 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DPH57_11480 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DPH57_11480 (glyA)
Enzymes [BR:
masy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DPH57_11480 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AXA91715
UniProt:
A0A7U6B404
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All DBs
Position
complement(2693009..2694256)
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AA seq
415 aa
AA seq
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MFAKDHTLAAIDPELFGAIQNENRRQHDHIELIASENYTSPAVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRVKQLFGAEAANVQPNSGSQANQGVFFAVLKPGDTIMGMS
LAEGGHLTHGMALNMSGKWFNVVSYGLTAEEDIDYDAMEKLAHEHKPKLIVAGASAFSKK
IDWERFAKVAKAIGAYFMVDMAHYAGLIAAGLYPNPVPHADFVTSTTHKSLRGPRGGIIL
MKAEHEKIINSAIFPGIQGGPLMHVIAGKAVAFKEALGEDFKAYQAQVIKNADVLAKTLI
KRGLRIVSGGTESHVFLVDLRAKNLTGKEAEAILGSAHITCNKNGIPNDPQKPFVTSGIR
LGSPAMTTRGFKEAEAEEVGNLIADVLDNPHDAATIERVKAAVKVLADKYPVYAA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcaaaagatcacaccctcgccgccatcgatcccgagctgttcggcgccatccag
aacgagaaccgccgccagcacgaccacatcgagctgatcgcctcggagaactacacctcc
ccggccgtcatgcaggcgcagggttcgcagctgaccaacaagtacgccgaaggctacccg
ggcaagcgctactacggcggctgcgaatacgtcgacgtcgtcgagcagctggccatcgac
cgtgtcaagcagctgttcggcgcggaagcggccaacgtgcagccgaactcgggctcgcag
gccaaccagggcgtgttcttcgccgtgctgaagccaggcgacacgatcatgggcatgtcg
ctggccgaaggcggtcacctgacccacggcatggcgctgaacatgtccggcaaatggttc
aacgtggtttcctacggcctgaccgccgaggaagacatcgactacgacgcgatggaaaag
ctggcccacgagcacaagccgaagctgatcgtggccggcgcttccgccttctcgaagaag
atcgactgggagcgcttcgccaaggtcgccaaggccatcggcgcctacttcatggtcgac
atggcccactacgccggcctgatcgccgccggcctgtatccgaacccggtgccgcatgcc
gacttcgtcacctccaccacgcacaagtcgctgcgcggcccgcgcggcggcatcatcctg
atgaaggccgagcacgaaaagatcatcaactcggccatcttccccggcatccagggcggc
ccgctgatgcacgtgatcgccggcaaggccgtcgcgttcaaggaagcgctgggcgaggac
ttcaaggcctaccaggcgcaagtgatcaagaacgccgacgtgctggccaaaacgctgatc
aagcgtggcctgcgcatcgtttccggcggcaccgagtcgcacgtgttcctggtcgacctg
cgcgccaagaacctgaccggcaaggaagccgaggcgatcctgggcagtgcccacatcacc
tgcaacaagaacggcattccgaacgacccgcagaagccgttcgtcacgtccggcattcgc
ctgggcagcccggccatgacgacgcgcggcttcaaggaagcggaagccgaggaagtgggc
aacctgatcgccgacgtgctggacaacccgcacgacgccgccaccatcgagcgtgtcaag
gctgccgtcaaggtgctggccgacaaatatccggtctacgcggcctga
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