Massilia sp. YMA4: DPH57_11710
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Entry
DPH57_11710 CDS
T05528
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
masy
Massilia sp. YMA4
Pathway
masy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
masy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DPH57_11710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masy03019
]
DPH57_11710
03009 Ribosome biogenesis [BR:
masy03009
]
DPH57_11710
Messenger RNA biogenesis [BR:
masy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DPH57_11710
Ribosome biogenesis [BR:
masy03009
]
Eukaryotic type
Pre-60S particles
RNases
DPH57_11710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
pP_pnuc_1
Motif
Other DBs
NCBI-ProteinID:
AXA91753
LinkDB
All DBs
Position
complement(2746169..2746699)
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AA seq
176 aa
AA seq
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MNLVWVDMEMTGLEPDTDRIIEVAIVVTDMHLNVLAEGPVLVIHQSDATLDAMDSWNKGT
HGRSGLIDKVKASTVTEEQAEAELIAFMKQWVPAGKSPMCGNTIGQDRRFMVRYMPKLEA
FFHYRNVDVSTIKELCRRWKPEVIAGFKKAQKHTALADILESIEELKYYREHFIKL
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggtgtgggtcgacatggaaatgacgggcctggagcccgacaccgaccgcatc
atcgaggtcgccatcgtcgtcaccgacatgcacctgaacgtgctggccgaaggcccggtg
ctggtgatccaccaatccgatgccacgctggacgcgatggattcctggaacaagggcacg
cacggccgttcgggcctgatcgacaaggtcaaggcctccacggtgacggaggagcaggcc
gaggccgagctgatcgcgttcatgaagcagtgggtgccggcgggtaaatcgccgatgtgc
ggcaacacgatcggccaggaccgccgcttcatggtgcgctacatgcccaagctggaagcg
ttcttccactaccggaacgtggacgtgtcgaccatcaaggaactgtgccgccgctggaag
ccggaagtgatcgccggcttcaagaaggcgcagaagcacacggcgctggccgacatcctc
gagtcgatcgaggagctgaagtactaccgcgagcatttcataaagctgtga
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