Massilia sp. YMA4: DPH57_12695
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Entry
DPH57_12695 CDS
T05528
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
masy
Massilia sp. YMA4
Brite
KEGG Orthology (KO) [BR:
masy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
masy03032
]
DPH57_12695
03036 Chromosome and associated proteins [BR:
masy03036
]
DPH57_12695
03400 DNA repair and recombination proteins [BR:
masy03400
]
DPH57_12695
DNA replication proteins [BR:
masy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DPH57_12695
Chromosome and associated proteins [BR:
masy03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
DPH57_12695
DNA repair and recombination proteins [BR:
masy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
DPH57_12695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
CATASP
Par3_HAL_N_term
Motif
Other DBs
NCBI-ProteinID:
AXA91928
LinkDB
All DBs
Position
complement(2982948..2983253)
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AA seq
101 aa
AA seq
DB search
MTKSELINRLAERYSQLVAKDAEYAVKTILDAMTTALASGQRIEIRGFGSFALNSRPPRI
GRNPKSGDKVMVPEKRVPHFKPGKQLRERVDAMVGQPIIED
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtccgaactgatcaaccgcctggccgagcgttattcgcagctggtggcgaaa
gacgcggagtatgccgtgaagaccattctcgacgcgatgaccaccgccctggcgagtggt
cagcgcatcgagatccggggcttcggcagcttcgcgctgaacagccggccaccgcgcatc
ggccgcaatccgaagtccggcgacaaggtgatggtgcccgaaaaacgggtaccgcacttc
aagccgggcaagcagttgcgcgagcgggtggacgcgatggtcgggcaaccgatcatcgag
gactga
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