Massilia sp. YMA4: DPH57_12735
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Entry
DPH57_12735 CDS
T05528
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
masy
Massilia sp. YMA4
Brite
KEGG Orthology (KO) [BR:
masy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
masy03032
]
DPH57_12735
03400 DNA repair and recombination proteins [BR:
masy03400
]
DPH57_12735
Enzymes [BR:
masy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DPH57_12735
DNA replication proteins [BR:
masy03032
]
Prokaryotic type
DNA Topoisomerases
DPH57_12735
DNA repair and recombination proteins [BR:
masy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DPH57_12735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AXA91935
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Position
complement(2991772..2994444)
Genome browser
AA seq
890 aa
AA seq
DB search
MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLFSMHESNYVHN
RPYVKCARVVGDTMGKYHPHGDSSIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGDAAAAM
RYTECRLDKIAGELLADIDKETVDFQPNYDGKEKEPTVLPTRVPNLLINGSSGIAVGMAT
NIAPHNLSEVINGALHVLANPACSVDELIELIPAPDFPTGGIIYGVSGVRDGYRTGRGRV
VMRAKTHFEEFGKEGGRTAIIVDELPYQVNKKSLLERIAENVRDKKLEGISDIRDESDKS
GMRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPKLMNLKELLATFLSHRR
EVVTRRTVFELRKARERGHVLEGLAVALANIDDFIAIIKAAPTPPLAKTELMARAWDSSL
VREMLARTGDEGQAGIEAFRPEHLPKHYGMQPDGLYKLSDDQAQEILQMRLQRLTGLEQD
KIVNEYKDVMAQIADLLDILAKPARVTAIIGDELNAAKLEYGAKDERRSTIEHNATDLET
EDLITPQDMVVTLSHMGYMKAQPISEYRAQKRGGRGKQAMATKDEDWIDQLFIANTHDYI
LCFSNRGRMYWLKVWEVPQGSRTSRGKPIVNMFPLQDNEKITVVLPLSGENRTFPEDHYV
FMSTSLGTVKKTPLKDFSNPRKAGIIAVDLDEGDFLIGAALTDGKHDVMLFSDSGKAVRF
DENDVRPMGRTARGVRGMNLEEGQNVIALLVAENEQQSVLTATENGYGKRTPITEYTRHG
RGTKGMIAIQTSERNGKVVAATLVDTTDEIMLITTGGVLIRTRVSEIREMGRATQGVTLI
AVEDGTKLSGLQRIVEADADEVELEPEGGAAAATPAAEPDTPAADDTAAE
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggatcaattcgcaaaagaaacaatcccaatttccctcgaagaagagatgcgcaagagc
tacctcgattacgcgatgagcgtgatcgtgggccgcgccttgccggatgcgcgcgacggc
ttgaagccagtgcaccgccgggtgttgttctcgatgcacgagagtaattacgtgcacaac
cgtccatacgtcaagtgcgcgcgcgtcgtcggcgacacgatgggtaaataccacccgcac
ggcgactcgtcgatctacgacacgctggtgcgcatggcccaggacttctcgctgcgctat
acgctggtggacggccagggcaacttcggttccatcgacggcgacgccgcggcggccatg
cgttacaccgagtgccgcctggacaagatcgccggcgagctgctggccgacatcgacaag
gaaaccgtcgacttccagccgaactacgatggcaaggaaaaagagccgaccgtgctgccc
acgcgcgtgccgaacctgctgatcaacggctcctccggtatcgcggtcggcatggcgacc
aatatcgccccgcacaacctgtcggaagtgatcaacggcgcgctgcacgtgctggccaac
ccggcctgctcggtggacgaactgatcgaactgatcccggcgccggatttcccgaccggc
ggcatcatctacggcgtctccggcgtgcgcgacggctaccgcacgggccgcggccgcgtc
gtcatgcgcgccaagacccacttcgaggaattcggcaaggaaggcggtcgcacggcgatc
atcgtcgacgagctgccataccaggtcaataaaaaatccctgctggagcgcatcgccgag
aacgtgcgcgacaagaagctggaaggcatctccgacatccgcgacgagtccgataaatcg
ggcatgcgcgtcgtcatcgagttgaagcgcggcgaagtgccggaagtggtgctgaacaac
ctgtacaagcagacccagctgcaggacaccttcggcatgaacatggtcgcgctggtcgac
ggccagccgaagctgatgaacctgaaggagctgctggccacgttcctgtcgcaccgccgc
gaagtggtcacgcgccgcaccgtgttcgagctgcgcaaggcgcgcgaacgcggccacgtg
ctggaaggcctggcggtcgcgctggcgaacatcgacgacttcatcgccatcatcaaggcg
gcgccgacgccgccgctggcgaagaccgaactgatggcgcgcgcctgggattcgtccctg
gtgcgcgaaatgctggcccgcacgggcgacgaaggtcaggccggcatcgaggcgttccgc
cccgagcacctgccgaagcactacggcatgcagccggacggcctgtacaagctgtccgac
gaccaggcccaggaaatcctgcagatgcgcctgcagcgcctgacgggcctggagcaggac
aagatcgtcaacgaatacaaggacgtgatggcgcagatcgccgacctgctggacatcctg
gccaagccggcccgcgtgaccgcgatcatcggcgacgaactcaatgcggccaagctggaa
tacggcgccaaggacgagcgccgctcgaccatcgagcacaacgcgaccgacctggaaacg
gaagacctgatcacgccgcaggacatggtggtcaccctgtcgcacatgggctacatgaag
gcccagccgatctccgaataccgcgcgcagaagcgcggcgggcgcggcaagcaggccatg
gcgaccaaggacgaggactggatcgaccagctcttcatcgccaacacgcacgactacatc
ctgtgcttctcgaatcgcggcaggatgtattggctgaaggtgtgggaagtgccgcagggt
tcgcgcacctcgcgcggcaagccgatcgtcaacatgttcccgctgcaggacaacgagaag
atcaccgtcgtgctgccgctgtcgggcgaaaaccgcacgttcccggaagaccattacgtg
ttcatgtccaccagcctgggcaccgtcaagaagacgccgctgaaggacttcagcaatccg
cgcaaggccggcatcatcgccgtcgacctggacgagggcgacttcctgatcggcgccgcg
ctgaccgacggcaagcacgacgtgatgctgttctccgactccggcaaggcggtgcgcttc
gacgagaacgacgtgcgcccgatgggccgcacggcgcgcggcgtgcgcggcatgaacctg
gaagaaggccagaacgtgatcgcgctgctggtcgcggagaacgagcagcagtccgtgctg
acggccaccgagaacggctacggcaagcgcacgccgatcacggaatacacccgtcacggc
cgcggtaccaagggcatgatcgcgatccagacctccgagcgtaacggcaaggtcgtcgcg
gccacgctggtggacaccaccgacgagatcatgctgatcacgacgggcggtgtgctgatc
cgcacccgcgtctccgagatccgcgagatgggccgggccacccagggcgtcaccctgatc
gcggtggaggatggcaccaagctgtccggcctgcagcgcatcgtcgaggcggatgcggac
gaagtcgagctcgagccggaaggcggcgcggcggcggcaacgcctgcggcggagcccgac
acgccagcggccgacgacaccgcggccgaatga
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