Massilia sp. YMA4: DPH57_13605
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Entry
DPH57_13605 CDS
T05528
Name
(GenBank) rhamnogalacturonan lyase
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
masy
Massilia sp. YMA4
Brite
KEGG Orthology (KO) [BR:
masy00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
DPH57_13605
Enzymes [BR:
masy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
DPH57_13605
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GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP
FG-GAP_3
DUF1198
Motif
Other DBs
NCBI-ProteinID:
AXA92092
UniProt:
A0A7U5XZ98
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All DBs
Position
3182408..3184249
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AA seq
613 aa
AA seq
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MTRTFALRLLPALLALPLLQTAAADTGKQVEKLDRGVVAIATGGGVFVGWRVLGTDAADT
RYNVYRDGARLNAAPLEASNFVDPAGTAAAQYVVRTVVKGSEKDKDSAGATWPQAVLRIP
VQAPAGGVTPDGVAYTYELNDGSAADLDGDGKYELVVKWQPTNAKDNSQSGYTGNTYVDA
YEWSGKRLWRIDLGRNIRAGAHYTTFLAYDFDGNGRAEVMMKTADGTIDGRGTVIGDAAA
DHRNSAGYVLAGPEFLTVFDGRTGKALATTNYLPARGDVAAWGDKYGNRVDRFTGSVAYL
DGSRPSAVFARGYYTRAVVAAWDWRDGVLSSRWVFDTDVEGAAARGQGAHWFSVADVDND
GRDDIVYGAATIGSDGHLLYSTNLCHGDALHVGKLDPARDGQQVFMVHESPGCYGTVGAG
MHDAATGKLLWSVPGNGRDVGRGVCMDIDPAWPGEECWASVGGLMSASGQQISATRPNRI
NFAAWWDGDLLRESLDGTGIDKWDPAALAFQRILEGATDGAASNNGTKATPVLSADLLGD
WREEVVLRSADNTALLVFATTTPTPYRIPTLMHDPQYRVQVAGQNAGYNQPPHPSFHLGE
GMKPVMPAPIRPR
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtaccttcgccctgcgcctcctccccgccctgcttgccctgcccctgctgcaa
accgccgccgccgacaccggcaagcaggtggaaaaactcgatcgcggcgtcgtcgccatc
gccaccggcggcggcgtgtttgtcggttggcgcgtgctgggcacggacgctgccgacacc
cgctacaacgtctaccgcgatggcgcgcgcctgaacgcggcgccgctggaggccagcaac
ttcgtcgacccggccggcacggcggcggcgcagtacgtggtgcgcaccgtcgtcaagggc
agcgagaaggacaaggacagcgccggcgccacttggccgcaagcggtgctgcgcattccc
gtgcaggcccccgccggcggcgtcacgcccgatggcgtggcctacacctatgagctgaac
gacggctcggccgccgatctcgatggcgacggcaagtacgaactggtcgtcaagtggcag
cccaccaacgccaaggacaactcgcagtccggctacaccggcaatacctatgtcgacgcc
tacgaatggagcggcaagcgcctgtggcgcatcgacctgggccgcaatatccgcgccggc
gcgcactacaccaccttcctggcctacgacttcgacggcaatggccgcgccgaagtgatg
atgaagacggccgacggcactatcgacgggcgcggcaccgtcattggcgacgcggcggcg
gatcaccgcaacagcgccggctacgtgctggcgggcccggaattcttgaccgtgttcgac
ggccgcaccggcaaggccctcgccaccaccaactacctgcccgcgcgcggtgacgtggcc
gcctggggcgacaagtacggcaaccgcgtcgaccgcttcaccggcagcgtggcctacctg
gacggctcgcgccccagcgcggtattcgcgcgcggctattacacgcgcgccgtggtggcg
gcctgggattggcgcgacggcgtgttgagcagccgctgggtgttcgacacggacgtcgag
ggcgccgcggcgcgcggccagggcgcgcactggttctcggtggccgacgtcgacaacgac
ggccgcgacgacatcgtctacggcgccgccaccatcggcagcgacggccacctgctgtac
agcaccaacctgtgccacggcgacgcgctgcacgtgggcaagctcgatcccgcacgcgac
ggccaacaggtcttcatggtgcacgagagccccggctgctacggcacggtcggcgctggc
atgcacgacgcggccaccggcaagctgctgtggagtgtgccaggcaacgggcgcgacgtg
ggccgcggcgtctgcatggacatcgacccggcctggccgggcgaggaatgctgggcctcc
gtcggcggcctgatgagcgccagcggccagcagatttccgccacgcggccgaaccgcatc
aacttcgccgcctggtgggacggcgacctgctgcgcgaatcgctggacggcaccggcatc
gacaagtgggacccggccgccctggcgttccagcgcatcctggaaggcgccaccgatggc
gcggcctccaacaacggcaccaaggccacgcccgtgctgtcggccgacctgctgggcgac
tggcgcgaggaagtggtgctgcgcagcgccgacaacacggccctgctggtcttcgcgacg
accacgccgacgccctaccgcattccgaccctgatgcacgacccgcagtaccgcgtgcag
gtggcgggccagaacgccggctacaaccagccgccgcaccccagcttccaccttggcgaa
ggcatgaagccggtgatgccggcgccgatccgcccgcgctga
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