Massilia sp. YMA4: DPH57_13705
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Entry
DPH57_13705 CDS
T05528
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
masy
Massilia sp. YMA4
Brite
KEGG Orthology (KO) [BR:
masy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
masy03016
]
DPH57_13705
Enzymes [BR:
masy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DPH57_13705
Transfer RNA biogenesis [BR:
masy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DPH57_13705
Prokaryotic type
DPH57_13705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AXA92107
LinkDB
All DBs
Position
complement(3212968..3213897)
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AA seq
309 aa
AA seq
DB search
MTQQKVKRVRDLVDGVLLLDKPVGLSSNDALIKAKRILNAKKAGHTGTLDPFATGLLPLC
FGEATKFSQDLLEADKTYVTTVHLGVRTDTGDTEGQVLETLPVQVTVEQIEAVLARFRGP
IAQVPPMYSALKRDGKPLYEYARAGVVLEREARNVTIHKLELLGYEAPFLRLEVTCSKGT
YIRVLGEDIGAALGCGAHLNALRRIGVGALRAEQMITAEQLVAHPAPLELLAPVDALLRS
FPKVDLTPELARRFLQGQRLPLGKEPEVVTPAPYEGRVRVYQGTRLLGTGVLGEWAILAP
ERLIAAAQS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagcaaaaagtaaaacgggtgcgcgacctggtggacggcgtgctgctgctggat
aaaccggtgggcctgtcgtccaacgacgcgctgatcaaggccaagcgcatcctgaacgcg
aagaaggcgggccataccggcacgctcgatccgttcgccaccggcctgttgccgctgtgc
ttcggcgaagccaccaagttctcgcaggacctgctggaggcggacaagacctacgtgacg
accgtccacctgggcgtgcgcacggacacgggcgacaccgaaggccaggtgctggagacg
ctgccggtgcaggtgacggtcgagcagatcgaagccgtgctggcgcgcttccgtggcccg
atcgcccaggtaccgccgatgtactcggccttgaagcgcgacggcaagccgctgtacgag
tacgcccgcgccggcgtggtgctggagcgcgaggcgcgcaacgtcacgatccacaagctg
gagctgctcgggtacgaggcgccgttcctgcggctggaggtcacgtgcagcaagggcact
tacatccgcgtgctgggcgaggacatcggcgccgcgctgggctgcggcgcgcacctgaat
gcgctgcggcgcatcggcgtcggcgccctgcgcgccgagcagatgatcacggcggagcag
ctggtggcgcatccggcgccgctggaactgctggcaccggtcgacgcgctgctgcgctcc
ttcccgaaggtcgacctgacaccggagctggccaggcgcttcctgcagggccagcggctg
ccgctggggaaggagccggaggtcgtcacgccggcaccttacgaggggcgggtgcgtgtg
taccagggtactcgcttgctgggcacgggcgtgctgggcgagtgggcgattctggcgccg
gagcggctgatcgctgcggcgcaaagctga
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