Massilia sp. YMA4: DPH57_14065
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Entry
DPH57_14065 CDS
T05528
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
masy
Massilia sp. YMA4
Brite
KEGG Orthology (KO) [BR:
masy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
masy02000
]
DPH57_14065
Transporters [BR:
masy02000
]
Other transporters
Pores ion channels [TC:
1
]
DPH57_14065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DUF5916
Motif
Other DBs
NCBI-ProteinID:
AXA94727
LinkDB
All DBs
Position
3319503..3322379
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AA seq
958 aa
AA seq
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MLVLGHATAQTTPAADEPTKVVVTGLRASLESALNKKREDNGIVDVIKAEDMGKFPDTNL
AESLQRVPGVVINRDAGEGRNITVRGLGQDFTRVRINGIEGLATTGGTDSSGGANRSRGF
DFNVFASELFSSLTVRKSSSADVDEGSLGATVDLTTMRPFDLKGFNATITAKGKYNDLSE
KTDPRVAFLLSNTFMDRKLGVLVSGAYSKRQVLEEGFSTVRWDNGPSSGGWCAPQGVAAN
PANSTAATCGPAAQGVARLPFSQGAVDAYNAASSAANFTPRIPRYGRLAHDQDRLGLTAS
VQWRPMRGALLTFDMLYSKLDASRQEDYLEAISFSRGGTQGGKPQTSVVEALYAPNGALL
YGKFNGVDVRAESRYDELTTTFTQPTLTWEQDLAEGWRLNAKLGRAKSKFRNPIQTTTTL
DALNVNGYTMDFRDNDRLPTIGYPFDPTQAGGALTIVGVPQVASGTQPSSIPNTTASEIR
IRPQGTTNTTDVADVNVSWDVLPDRFSLKAGASAKKYTFDSYEFRRVNQGDTIFAPPAGT
SVASLTTTLTGFGKGLGLPAGTPTSWAMPNLPAIAQAYDIYCNCIKSGPAGGPGDFTLSS
IENANARGNNRSVLEEDKGLYLMGDFNTELAGIPLRGNVGVRYVRTDLSSTGYVASNGGT
AVTVDNRYSDTLPAFNVAATLRPDFIVRFGASKVMTRPQLNDLSPGGTIATTGTLSITSG
NPNLKPFRAKTFDSSFEWYFARNSFLGLGLFQKNIDTYIQSLRTDVRFRDTGLPLSLLPT
NFTGDEVFAVTAPINTEGGKLRGFEINYQQPFTFLPGIGKNFGALLNYTYVKSTMEYLVS
PNGGATITDDLLNLSPKSWNATFYYDDGRFSARVSTSQRDAFLTRVPGQNNNDVEGKNKS
LNVDLSLSYKVNDKLDLTFEGVNLTDEENDQFISRQRNSVVVNHVTGREYLLGLRYKF
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
ttgctggtcctcggtcatgccaccgcccagaccacccctgccgccgacgaaccgaccaag
gtcgtcgtcacgggcctgcgcgcgtcgctggaatcggccctgaacaagaagcgtgaggac
aacggcatcgtcgacgtcatcaaggcggaagacatgggcaagttccccgacacgaacctg
gccgaatcgctgcagcgcgtgccgggcgtcgtcatcaaccgcgacgccggcgaaggccgc
aacatcaccgtgcgcggcctgggccaggacttcacgcgcgtgcgcatcaacggcatcgaa
ggcctggcgacgacgggcggcacggattcctcgggcggtgccaaccgctcgcgcggcttc
gacttcaacgtgttcgcgtccgagctgttcagctcactcacggtgcgcaagagctcctcg
gccgacgtcgacgaaggctcgctgggcgccaccgtcgacctgaccacgatgcgtccgttc
gacctgaagggcttcaacgccaccatcaccgccaagggcaagtacaacgacctctcggag
aagaccgacccgcgcgtcgctttcctgctgtcgaacaccttcatggaccgcaagctgggc
gtgctggtatcgggcgcctactcgaagcggcaggtgctggaggaaggcttctccaccgtg
cgctgggataacggcccgtcgtccggcggctggtgcgcgccgcagggcgtggccgccaac
ccggccaactccaccgccgccacctgcggcccggccgcgcaaggcgtggcgcggctgccg
ttctcgcagggcgcggtggacgcctacaacgcggccagcagcgccgccaacttcacgccg
cgcatcccgcgctacggccgcctggcgcacgaccaggaccgcctcggcctgacggcctcg
gtgcagtggcgcccgatgcgcggcgcgctgctgaccttcgacatgctgtactcgaagctg
gatgcgtcgcgccaggaagactacctggaggcgatctcgttctcgcgcggcggcacgcag
ggcggcaagccgcagaccagcgtggtcgaggcactgtacgcgcccaacggcgcgctgttg
tacggcaagttcaatggcgtcgatgtgcgcgccgagtcgcgctacgacgagctgacgacg
actttcacccagccgaccttgacgtgggagcaggacctggccgaaggctggcgcctgaac
gcaaagctgggccgcgccaagtccaagttccgcaacccgatccagaccaccaccacgctg
gacgcgctgaacgtcaatggctacacgatggacttccgcgacaacgaccgtctgccgacg
atcggctacccgttcgatccgacccaggcgggcggcgcgctgacgatcgtcggcgtgccg
caggtggcaagcggcacgcagccatcctcgatcccgaacacgacggccagcgagatccgc
atccgcccgcaaggcacgaccaacacgaccgacgtggcggacgtcaacgtctcgtgggac
gtgctgccggaccgcttcagcctgaaagccggcgccagcgcgaagaagtacacgttcgat
tcgtacgagttccgccgcgtgaaccagggcgatacgatcttcgcgccgccggccggcacc
tcggtggccagcctgacgaccacgttgacgggcttcggcaagggcctcgggctgccggcg
ggcacgccgaccagctgggcgatgccgaacctgccggcgatcgcgcaggcctacgacatc
tactgcaactgcatcaagagcggcccggccggcggtcccggcgacttcacgctgtcgtcg
atcgagaacgccaacgcgcgcggcaacaaccgctcggtgctggaagaggacaagggcctg
tacctgatgggcgacttcaacacggaactggccggcatcccgctgcgtggcaacgtgggc
gtgcgctacgtgcgcaccgacctgtcctcgaccggctacgtggcgtccaacggcggcacg
gccgtcacggtggacaaccgctattcggacacgctgccggcctttaacgtggcggccacg
ttgcggcccgacttcatcgtccgcttcggcgcatccaaggtcatgacgcgcccgcagctg
aacgacctgtcgccgggcggcaccatcgccaccaccggcaccctgtcgatcaccagcggc
aatccgaacctgaagccgttccgcgccaagacgttcgattccagcttcgagtggtacttc
gccaggaacagcttcctgggcctgggcctgttccagaagaacatcgacacgtatatccaa
agcctgcgcaccgacgtgcgcttccgcgacacgggcctgccgctgtcgctgctgccgacc
aatttcacgggcgacgaggtgttcgcggtgacggcgccgatcaatacggaaggcggcaag
ctgcgcggcttcgagatcaactaccagcagccgttcacgttcctgccggggatcggcaag
aacttcggcgccctgctgaactacacctacgtcaagtcgacgatggagtacctggtgtcg
cccaacggcggcgcgacgatcacggacgacctcctcaacctgtcgccgaaatcctggaac
gccacgttctactacgacgacggccgcttcagcgcccgtgtctcgacctcgcagcgcgac
gccttcctgacccgcgtgccgggccagaacaacaacgacgtggaaggcaagaacaagtcg
ctgaacgtggacctgtcgctgtcgtacaaggtcaacgacaagctcgatctgaccttcgag
ggcgtcaacctgaccgacgaggagaacgaccagttcatcagccgccagcgcaacagcgtg
gtcgtcaaccatgtgacgggacgggagtatctgctggggttgcgctacaagttctga
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