Massilia sp. YMA4: DPH57_14900
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Entry
DPH57_14900 CDS
T05528
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
masy
Massilia sp. YMA4
Pathway
masy00470
D-Amino acid metabolism
masy00550
Peptidoglycan biosynthesis
masy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
masy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DPH57_14900
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DPH57_14900
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
masy01011
]
DPH57_14900
Enzymes [BR:
masy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
DPH57_14900
Peptidoglycan biosynthesis and degradation proteins [BR:
masy01011
]
Precursor biosynthesis
Amino acid ligase
DPH57_14900
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AXA92318
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Position
complement(3523642..3525144)
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AA seq
500 aa
AA seq
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MIYNGKIALVLGLGESGLAMAQWLARCGALLRVADTRAVPDRLPVLRETLPGTQFVAGPF
DAKLLDGVDFVAVSPGLAPQRELAEIMPAAQAANIPVWGEIEIFAQALAWLKEDRGYAPK
VIAITGTNGKTTVTTLTGQLCERAGLTVRVAGNISPAALDVLREAMADTDTLPQAWVLEL
SSFQLHTTYSLRADAATVLNVTQDHLDWHGTMDAYAHDKARIFGPDTVRVLNRNDAVTLR
MADPTGVNVTFGTDAPEAPGSFGLVNERGVYWLATSEPVDDAEPKKRRKNEPAPVVETYL
KKLMPADALQIRGTHNASNALAALALCRAIGLPFAPLLHALRDYKGQPHRVELVAAIDGV
EFYDDSKGTNVGATVAAIDGLGKSFGGENQKLVLIAGGDGKGQAFEPLADPVARHVRAVL
LIGRDAPAIRAALVDAGVRLEDCATLEEATRRAAALAHGGDAVLLSPACASLDMFKNYAH
RAQVFIDTVRELALDAGQEI
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgatctacaacggcaaaatcgcattggtactggggctcggcgaatcgggcctggcgatg
gcgcagtggctggcccgctgcggcgctctgctgcgcgtggccgacacgcgcgccgtgccc
gatcgcctgcccgtgctgcgcgaaacgctgccgggcacgcagttcgtggccgggcccttc
gacgcgaagctgctcgatggggtcgacttcgtcgccgtcagcccgggcctggcgccgcag
cgcgagctggccgagatcatgccggccgcgcaggccgccaatatcccggtgtggggcgag
atcgagatcttcgcccaggccctggcctggctgaaggaagaccgcggctatgcgccgaag
gtcatcgccatcaccggcaccaacggcaagaccaccgtcaccaccctgacgggccagctg
tgcgagcgcgccggcctgaccgtacgcgtggccggcaatatcagcccggccgcactggac
gtgctgcgcgaggccatggcggacacggacacgctgccgcaagcctgggtgctggagctg
tccagcttccagctgcacacgacgtacagcctgcgcgcggacgcggcgacggtgctgaac
gtgacccaggatcacctcgactggcacggcacgatggacgcctatgcgcacgacaaggcg
cgcatctttggcccggataccgtgcgggtattgaaccgcaatgacgcggtgaccctgcgc
atggccgacccgactggcgtcaacgtcaccttcggcaccgatgcgccggaagcgccgggc
agcttcggcctcgtcaacgagcgcggcgtgtactggctggccaccagcgagccggtggat
gacgccgagccgaagaagcgccgcaagaacgagcctgcgcccgtcgtcgagacctacctg
aagaagctgatgccggccgatgcgctgcagatccgcggcacgcacaatgcctcgaacgcg
ctggccgcgctggcgctgtgccgtgccattggcctgccgttcgcgccgctgctgcacgcg
ctgcgcgactacaaaggccagccgcaccgtgtcgagctggtggcggcgatcgacggcgtc
gagttctacgacgacagcaagggcaccaatgtcggcgccaccgtggccgccatcgatggc
ctcggcaagagcttcggcggcgaaaaccagaagctggtgctgatcgccggcggcgacggc
aagggccaggcattcgaaccgctggccgatccggtcgcgcgccacgttcgggcggtgctg
ctgatcggccgcgacgctccggccatccgcgccgcgctggtcgatgccggcgtgcgcctg
gaggactgcgccacgctggaggaggccaccaggcgcgccgccgcgctggcgcatggcggc
gacgccgtgctgctgtcgccggcctgcgccagcctggacatgttcaagaactacgcgcat
cgcgcgcaggtgttcatcgacaccgtgcgcgagctggcgctggacgcggggcaggagatc
tga
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