Massilia sp. YMA4: DPH57_15345
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Entry
DPH57_15345 CDS
T05528
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
masy
Massilia sp. YMA4
Pathway
masy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
masy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DPH57_15345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
masy03400
]
DPH57_15345
Enzymes [BR:
masy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
DPH57_15345
DNA repair and recombination proteins [BR:
masy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
DPH57_15345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Motif
Other DBs
NCBI-ProteinID:
AXA92401
UniProt:
A0A7U6B559
LinkDB
All DBs
Position
complement(3613001..3613276)
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AA seq
91 aa
AA seq
DB search
MVKKTNGDSTNADNAGSPATPASFEEAMAELAQLVTQMESGQLPLEASVAAYARGSELVK
FCAGQLDKVEAQVKVFEGDMLKPFADDEAGL
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagaaaacgaacggcgacagcacgaacgccgacaacgccggcagtccggcgacc
ccggcaagcttcgaggaagcgatggccgaactggcccagctggtcacgcagatggaatcg
ggccagctgccgctggaagcctccgtcgccgcctacgcccgcggctccgaactggtgaag
ttctgcgccgggcaactcgacaaggtcgaggcccaggtcaaggtcttcgaaggcgacatg
ctgaaacccttcgccgacgacgaggcaggcctatga
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