Massilia sp. YMA4: DPH57_16195
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Entry
DPH57_16195 CDS
T05528
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
masy
Massilia sp. YMA4
Pathway
masy00521
Streptomycin biosynthesis
masy00523
Polyketide sugar unit biosynthesis
masy00541
Biosynthesis of various nucleotide sugars
masy01100
Metabolic pathways
masy01110
Biosynthesis of secondary metabolites
masy01250
Biosynthesis of nucleotide sugars
Module
masy_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
masy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DPH57_16195 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DPH57_16195 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DPH57_16195 (rfbC)
Enzymes [BR:
masy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
DPH57_16195 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AXA92550
UniProt:
A0A7U5Y0K7
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Position
complement(3796646..3797191)
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AA seq
181 aa
AA seq
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MKVTTTPIDGLLIIEPTVFGDDRGFFYESFNAQRFADLTGVRADFVQDNHSRSARNVLRG
MHYQIQQAQGKLVRVVSGSVYDVAVDLRKSSPTFGRWFGVELSAENKRQFWIPPGFAHGF
AVTSEFAEFLYKTTDYYAPEHERALLWNDPAVGIEWPLDGTPLLSAKDQKALPLAQAEVF
P
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcacgaccactcccatcgatggcctcttgatcatcgagccgaccgtgttcggc
gacgaccgcggcttcttctacgagagcttcaatgcgcagcgcttcgccgacctgacgggc
gtgcgggccgacttcgtgcaggacaaccattcccgctccgcgcgcaacgtgctgcgcggg
atgcactaccagatccagcaggcgcagggcaagctggtgcgcgtcgtcagcggcagcgtg
tacgacgtggccgtcgacctgcgcaaaagctcgcccacgttcggcaggtggttcggcgtc
gagctgtcggccgagaacaagcgccagttctggattccgccgggcttcgcgcatgggttc
gcggtgaccagcgagttcgccgaattcctgtacaagaccaccgattactacgcccccgag
cacgagcgtgcgctgctgtggaacgacccggcggtgggcatcgagtggccgctggacggc
acgccgctgctgtcggccaaggaccagaaggcgctgccgctggcacaggcggaagtgttc
ccatga
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