Massilia sp. YMA4: DPH57_18845
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Entry
DPH57_18845 CDS
T05528
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
masy
Massilia sp. YMA4
Pathway
masy00061
Fatty acid biosynthesis
masy00071
Fatty acid degradation
masy01100
Metabolic pathways
masy01212
Fatty acid metabolism
masy02024
Quorum sensing
masy04146
Peroxisome
Module
masy_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
masy00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
DPH57_18845
00071 Fatty acid degradation
DPH57_18845
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
DPH57_18845
09145 Cellular community - prokaryotes
02024 Quorum sensing
DPH57_18845
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
masy01004
]
DPH57_18845
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
masy04147
]
DPH57_18845
Enzymes [BR:
masy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
DPH57_18845
Lipid biosynthesis proteins [BR:
masy01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
DPH57_18845
Exosome [BR:
masy04147
]
Exosomal proteins
Exosomal proteins of breast milk
DPH57_18845
Exosomal proteins of breast cancer cells
DPH57_18845
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AXA93026
UniProt:
A0A7U5Y106
LinkDB
All DBs
Position
complement(4393314..4394984)
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AA seq
556 aa
AA seq
DB search
MEKIWLKSYPEGVPAEIDCTQYRSVTHLLEDSFRKYANQNACVCMDKFLTYAQLDQMSQK
FGAWLQGKGLKQGARVAIMLPNVLQYPVVMAGILRAGYTVVNVNPLYTPRELEHQLKDSG
AEAIVVLENFATTVQEVLHNTPVKHVIVASMGDLLGGIKGAIVNFAVRHVKKMVPAYSLP
TAIPFKQVLAEGSRMTLSPVKTGHDDIAFLQYTGGTTGVSKGAMLTHRNIIANVLQNDAW
LQMKPGSDQLVFVCALPLYHIYSLTISALMSMRVGGLNVLIPNPRDIPGFVKELAKYKVT
VFPAVNTLYNALLNNPDFHKLDFSSYKICNGGGMAVQQAVADRWLKVTGTPIIEGYGMSE
TSPVATANRIDIKEFTGTIGLPISSTDIAILDDDGNKLPLGATGEIAIRGPQVMAGYWQR
PDETAKSMTADGFFKTGDVGIMDERGYTRIVDRKKDMIIVSGFNVYPNEVEGVVAAHPGV
LECACIGVPDKNSGEAVKLFVVRKDPNLTAEQLQDFCKHELTAYKKPKYIEFRDELPKTN
VGKILRRQLRDEKQAA
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatctggttgaaatcctatcctgaaggcgtaccggccgaaatcgactgcacg
cagtaccgctcggtcacgcacttgctggaggattcgttccggaagtacgcgaaccagaac
gcgtgcgtgtgcatggacaagttcctgacctatgcgcagctggaccagatgtcgcagaag
ttcggtgcctggttgcagggcaagggcctgaagcagggcgcccgcgtggcgatcatgctg
cccaatgtgctgcagtaccccgtggtgatggccggcatcctgcgcgccggctacacggtc
gtcaacgtcaacccgctgtacacgccgcgcgagctggaacatcagctgaaggactccggc
gccgaagccatcgtcgtgctggagaacttcgcgaccaccgtgcaggaagtgctgcacaac
acgccggtcaagcacgtcatcgtcgcctcgatgggcgacctgctgggcgggatcaagggc
gccatcgtcaacttcgccgtgcgccacgtgaagaagatggtgccggcctattcgctgccg
acggcgatccctttcaagcaggtactggccgaaggcagtcgcatgacgctctcgccggtg
aaaacgggccacgacgacatcgccttcctgcagtacaccggcggcaccacgggcgtatcg
aagggcgcgatgctcacgcaccgcaatatcatcgccaacgtgctgcagaacgacgcctgg
ctgcagatgaagccgggcagcgaccagctggtgttcgtctgcgcgctgccgctgtatcac
atctactcgctgacgatcagcgcgctgatgagcatgcgcgtgggcgggctgaacgtgctg
atcccgaacccgcgcgacatccccggcttcgtcaaggaactggccaagtacaaggtcacc
gtgttccccgccgtgaacacgctgtacaacgcgctgctgaacaaccccgattttcacaag
ctggacttctccagctacaagatctgcaacggcggcggcatggccgtgcagcaggccgtg
gccgaccgctggctgaaggtgacgggcacgccgatcatcgaaggctacggcatgtcggag
acgtcgccggtggccactgccaaccgcatcgacatcaaggaattcaccggcaccatcggc
ctgccgatctcctcgaccgacatcgccatcctggatgatgacggcaacaaattgccgttg
ggcgcgaccggcgagatagcgatccgcggcccgcaggtgatggccggctactggcagcgc
ccggacgagacggcgaagtcgatgaccgcggatggcttcttcaagacgggcgacgtgggc
atcatggacgagcggggctatacccgcatcgtcgaccgcaagaaggacatgatcatcgtc
tccggcttcaacgtctacccgaacgaggtggaaggcgtcgtcgccgcgcatccgggcgtg
ctggaatgcgcctgcatcggcgtgccggacaagaactcgggcgaagcggtgaaactgttc
gtggtgcgcaaggacccgaacctgaccgccgagcagctgcaggacttctgcaagcacgag
ctgaccgcatacaagaagccgaagtacatcgagttccgcgacgagctgccgaagacgaac
gtgggcaagatcctgcggcgccagctgcgcgacgagaagcaggcggcgtaa
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