Massilia sp. YMA4: DPH57_19060
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Entry
DPH57_19060 CDS
T05528
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
masy
Massilia sp. YMA4
Pathway
masy00550
Peptidoglycan biosynthesis
masy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
masy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DPH57_19060
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
masy01002
]
DPH57_19060
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
masy01011
]
DPH57_19060
Enzymes [BR:
masy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DPH57_19060
Peptidases and inhibitors [BR:
masy01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
DPH57_19060
Peptidoglycan biosynthesis and degradation proteins [BR:
masy01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
DPH57_19060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
AXA93053
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Position
4452757..4453902
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AA seq
381 aa
AA seq
DB search
MKKLLAALVSSVLILSSAAAQTVPAPTIAAKSWLLLDATSGQVIAAQDPNMRVEPASLTK
IMTAYLTFMALRDKKLELNQMVNVSTRAWKVDSSSSKMFIDPAVPVSINDLLHGLMIQSG
NDAAVALAEAVAGDEGTFVTLMNREAQRLGMTNSKFANPHGLPSPDNYTTARDLSILAKH
VIQDFPQFYKIDSIKSFTYNKITQQNRNRLLWLDPSVDGMKTGHTESAGYCMVASAHRPS
GNLDRRLISVVMGTNSDATRTAESQKLLNWGFQNFDTVKLYAKGQAVDTPQVWKGAKNNV
KIGFRQDVMVTVPKGVAGKMKPVLERKDPLVAPLGEGTNVGKLKMVVDGKPMLELPVVAL
ESVEQASIFGRAWDAMRLWMK
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactgctcgcggcgctggtgtccagcgtcctgattctctcttccgccgccgcc
cagaccgtccccgcaccgaccatcgccgccaagtcctggctgctgctcgacgccaccagc
ggccaggtgatcgccgcgcaggacccgaacatgcgtgtcgagccggcctcgctgaccaag
atcatgacggcctacctgaccttcatggccctgcgcgacaagaagctggaactgaaccag
atggtcaacgtgtccacccgtgcctggaaggtcgattcctccagctcgaagatgttcatc
gacccggccgttccggtttccatcaacgacctgctgcacggcctgatgatccagtcgggc
aacgacgccgcggtggcactggccgaggcggtggcgggcgacgaaggcacgttcgtcacc
ctgatgaaccgcgaggcgcagcgcctgggcatgacgaactccaagttcgccaacccgcac
ggcctgccgagcccggacaattacacgacggcgcgcgacctgtcgatcctggccaagcac
gtgatccaggacttcccgcagttctacaagatcgactccatcaagagcttcacctacaac
aagatcacgcagcagaaccgcaaccgcctgctgtggttggacccgagcgtggacggcatg
aagaccggccacaccgaatcggccggctattgcatggtcgcgtcggcgcaccgccccagc
ggcaacctcgaccgccgcctgatctcggtggtaatgggtaccaactcggacgcgacccgc
accgccgaaagccagaagctgttgaactggggcttccagaacttcgataccgtcaagctg
tatgcgaagggacaggcggtcgatacgccgcaggtgtggaagggcgcgaagaacaacgtc
aagatcggcttccgccaggacgtgatggtcacggtgccgaagggcgtggccggcaagatg
aagcctgtgctggaacgcaaggacccgctggtggcgccgctgggcgaaggcaccaacgtg
ggcaagctgaaaatggtcgtggacggcaagccgatgctggaactgccggtcgtggcgctg
gaatccgtcgagcaggcctcgatcttcggccgcgcctgggatgcgatgcgcttgtggatg
aaataa
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