Massilia sp. YMA4: DPH57_22945
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Entry
DPH57_22945 CDS
T05528
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
masy
Massilia sp. YMA4
Pathway
masy00300
Lysine biosynthesis
masy00470
D-Amino acid metabolism
masy01100
Metabolic pathways
masy01110
Biosynthesis of secondary metabolites
masy01120
Microbial metabolism in diverse environments
masy01230
Biosynthesis of amino acids
Module
masy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
masy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DPH57_22945 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DPH57_22945 (lysA)
Enzymes [BR:
masy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DPH57_22945 (lysA)
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Paralog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AXA93747
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All DBs
Position
complement(5330742..5332019)
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AA seq
425 aa
AA seq
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MSHFDYQNGVLHAEGVALPAIAEQFGTPTYVYSKAQLLENFDAYANACASRDALVCYAMK
ANSNLAVLNLLAQRGTGFDIVSGGELLRVIAAGGDPKKVIFSGVGKSVDEMRLALEHDIL
CFNVESIPELHRLNDVAGTLGKKARVSLRVNPNVDPKTHPYIATGLKASKFGVAFSDALD
TYRVAAQLPHLDVAGIDCHIGSQLLDDAPLLEALDRLIELIDALAAEGIHLHHVDVGGGL
GIDYGVAGEEAPAPAGDYVTRVFRRVDAWRAEKHDGKGIKVIFEPGRSIVGNTGVLLTKV
EFIKHGEEKNFCIVDAAMNDMARPALYEAWMDMQPVKQASDEGAVFDVVGPICESGDWLA
RDRALPVESGDLLVMKTAGAYGMAMASNYNTRGRAAEVIVDGNQVHLVRRRETPQELFAL
ESVIR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatttcgactaccagaacggcgtgctgcacgccgaaggcgttgccttgcccgcc
atcgccgaacagttcggcacgcccacctacgtctactccaaggcccagctgttggaaaac
ttcgacgcctatgccaacgcctgcgccagccgtgacgcactggtctgctacgcgatgaag
gccaactccaacctggccgtattgaacctgctggcgcagcgcggcaccggcttcgacatc
gtctcgggcggcgaactgctgcgcgtgatcgccgccggcggcgacccgaaaaaagtgatc
ttctcgggcgtgggcaagagcgtggacgagatgcgcctggccctggagcacgacatcctg
tgcttcaacgtggagtcgatcccggaactgcaccgcctgaacgacgtcgccggcacgctg
ggcaagaaggcgcgcgtgtcgctgcgcgtgaaccccaacgtggacccgaagacccacccg
tacatcgccaccggcctgaaggccagcaagttcggcgtcgccttcagcgatgcgctggac
acctatcgcgtggccgcacagctgccgcacctggacgttgccggcatcgactgccacatc
ggctcgcagctgctggacgacgcgccgctgctggaagcgctggaccgcctgatcgagctg
atcgacgcgctggcggccgaaggcatccacctgcaccacgtggacgtgggcggcggcctg
ggcatcgactacggtgtcgccggcgaggaagcgccggcaccggcgggcgactacgtcacg
cgcgtgttccgccgcgtggacgcctggcgcgccgagaaacacgacggcaagggcatcaag
gtgatcttcgagccgggccgctcgatcgtgggcaataccggcgtgctgctgaccaaggtc
gaattcatcaagcacggcgaagagaagaacttctgcatcgtcgacgcggcgatgaacgac
atggcgcgcccggcgctgtacgaggcctggatggacatgcagcccgtgaagcaggccagc
gacgaaggtgccgtgttcgacgttgtcggcccgatctgcgagtcgggcgactggctggcg
cgcgatcgcgcgctgccggtggaaagcggcgacctgctcgtcatgaagacggccggcgcc
tacggcatggcgatggcctcgaactacaacacgcgcggccgcgccgccgaagtgatcgtc
gacggcaaccaggtgcacctggtgcgccggcgcgagacgccgcaggagctgttcgcgctg
gaaagcgtgatccgttaa
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