Massilia sp. YMA4: DPH57_24845
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Entry
DPH57_24845 CDS
T05528
Name
(GenBank) GGDEF domain-containing protein
Organism
masy
Massilia sp. YMA4
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Reg_prop
GGDEF
Y_Y_Y
SGL
GGDEF_2
PKD
Motif
Other DBs
NCBI-ProteinID:
AXA94896
UniProt:
A0A7U5Y4N1
LinkDB
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Position
complement(5747548..5750700)
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AA seq
1050 aa
AA seq
DB search
MHRSDIISPPPALRFPLRFPLRSAPRLSVRTFVLLLLGLLIVVLGATAALSQPAAPPTLR
FKQLGPLGNDEPSILSLLQDRQGFMWIGTHVNGLYRYNGYHAVRYTSRTNDPNSLPHDRV
SALYEDRQGRIWAGTQNGLARYNPETNNFTVFRAELGPKNRGIIKAIISDGKDGMWIASW
GGLQHFDPASGKFVVYAHDPALPGSLATNDVNAIALDAKGGVWAATWPGGLDYLPPGGKA
FVHHAVDLAEKPDPRRNIVRALQFDKAGALWIGTESGALRWDPGTPWSARKVLVTPNSRV
NSFYIDRQGTLWATTLSAGLLRWDARMERFSQFSHNPSDPFSLPGDNLRALAQDRGGMLW
VASFTDGISLVNLNSVGFTRYVPHSADQTGTPGTNAVLSIARAPDNKLWLGGNVGLSLFD
PANNKVVRRYVSDPSQPGTLTQNIVYCLYQDPEGPLWAGTSNGLNRLDQADGKFSSVHFG
DTASDYINAIAPGRGGVLWLATGNSLIRYLPAAGTWKIYRNDPNDPDTRSVNGTSVVLED
RSGRVWMGSEWNGGGLDLLDPKTGKFQHFVQDTTVADGLADDNVSSLHEDSLGRIWVGTS
KGLQQVILRDGKIGFRSYLDATHGAKILSIRNDLDDNLWVSTIAGLYRIEPATGKSLQYT
AADGMTDGFTINSSAPGPNGLLYFGGVHGMTAIAPRDVRSPSVAPQVAITDIKVYNHSLS
DARPQPGVKLEGAVTAPRRLTLSPPASGFSIEFAALHYTEPGLNRYAYRLEGFDADWVET
DATRRAATYTNLDPGRYVFRVKAANHRGVWNEDPAALIVTVTPPFWQAWWFRTAAVVLAA
AILWALYRWRVRRLTQLKAALERVVAQRTAELEQSNLKLAALSTTDGLTGITNRRGFDTQ
LATEWRRAARTGQPLALLVLDVDYFKKYNDRYGHVAGDACLRTVAELLTRHARRTTDLAA
RYGGEEFVLLAAATDATDAMQTAQAICTELAGLEVEHDESPFGRVTISIGVAVQVPHEHG
DPDDLVRRADRALYRAKIRGRNQAMLATEH
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgatccgacatcatctccccgccgcccgcattgcgcttccccttgcgcttcccc
ttgcgctcggctccgcgcctgtccgtccgcacgttcgtgctgttgctgctcggcctgctg
atcgtcgtcctgggcgcgaccgccgcgctgtcgcagccggcggcaccgcccaccctgcgc
ttcaagcagctgggcccgctcggcaacgacgagccgtcgatcctgtcgctgctgcaggat
cgccagggcttcatgtggatcggcacgcacgtcaacggcctgtaccgctacaacggctac
cacgccgtgcgctacacgagccgaaccaacgacccgaacagcctgccgcacgaccgcgtc
tcggcgctgtacgaggaccgccagggccgcatctgggccggcacgcagaacggcctggcc
cgctacaacccggagaccaacaacttcaccgtgttccgcgccgagctggggcccaagaac
cgcggcatcatcaaggccatcatttcggacggcaaggacggcatgtggatcgccagctgg
ggcggcctgcagcacttcgatccggccagcggcaagttcgtcgtgtacgcgcacgacccg
gcgctgccgggcagcctggccaccaacgacgtcaacgccatcgcgctggacgcgaagggc
ggcgtctgggccgccacctggccgggcgggctcgactacctgccgccgggcggcaaggca
ttcgtccaccatgccgtcgacctggccgagaagcccgacccgcgccgcaacatcgtgcgc
gcgctgcagttcgacaaggccggcgcgctgtggatcggcaccgaaagcggcgcgctgcgc
tgggaccccggcacgccgtggtcggcccgcaaggtgcttgtcacgccgaacagccgcgtc
aacagcttctatatcgaccgccagggcaccttgtgggccacgaccctgtcggccgggctg
ctgcgctgggatgcccgcatggagcgcttcagccagttctcgcacaaccccagcgacccg
ttctcgctgccgggcgacaacctgcgcgcgctggcccaggaccgcggcggcatgctgtgg
gtggcctcgttcaccgatggcatcagccttgtcaacctgaacagtgtcggcttcacccgc
tacgtgccgcacagcgccgaccagaccggcacgcccggcaccaatgccgtgctgagcatc
gcgcgcgcgccggacaataaactctggctgggcggtaacgtcggcctcagcctgttcgac
ccggccaacaacaaggtggtgcgacgctacgtttccgacccctcgcagcccggcaccctg
acgcagaacatcgtctactgcctgtaccaggaccccgaggggccgctgtgggcgggcacg
tcgaacggcctgaaccgcctcgaccaggccgacggcaagttcagctccgtgcatttcggc
gacaccgccagcgactacatcaacgccatcgcgccgggccgcggcggtgtgctgtggctg
gccaccggcaacagcctgatccgctacctgccggccgccggcacgtggaaaatctaccgc
aacgatcccaacgatccggacacgcgcagcgtcaacggcacctccgtggtgctggaggac
cgcagcggccgcgtctggatggggtcggaatggaacggcggcggcctcgacctgctggac
ccgaagaccggcaaattccagcacttcgtgcaggacaccacggtggcggacggcctggcc
gacgacaacgtctccagcctgcacgaggattcgctcggccgcatctgggtcggcacctcc
aagggcctgcagcaggtcatcctgcgcgacggcaagatcggcttccgctcctacctggac
gcgacgcacggcgccaagatcctgtcgatccgcaacgacctggacgacaacctgtgggtc
agcaccatcgccggcctgtaccgtatcgagccggccaccggcaagtcgctgcagtacaca
gcggcggacggcatgacggacggcttcacgatcaattcatcggcgccagggccgaacggc
ctgctctacttcggcggcgtgcacggcatgacggcgatcgccccgcgcgacgtgcgcagc
ccgtcggtggcgccgcaggtggccatcaccgacatcaaggtctacaaccattcgctcagc
gacgcgcggccgcagccgggcgtgaagctggaaggcgccgtgacggcgccgcgccgcctg
accctgtcgccgcccgcctccggcttctcgatcgagttcgcggcgctgcactacacggaa
ccgggcctgaaccgctacgcctaccggctggaaggcttcgacgcggactgggtcgagacg
gatgccacgcggcgcgcggcgacctacaccaacctcgatccgggccgctacgtgttccgc
gtcaaggccgccaaccatcgcggcgtgtggaacgaggacccggccgcgctgatcgtcacc
gtcacgccgccgttctggcaggcctggtggttccgcacggcggcggtggtgctggccgcg
gcgatcctgtgggcgctgtaccgctggcgcgtgcgccggctcacgcaactgaaggcggcg
ctggaacgggtggtggcgcagcgcacggccgaactggaacagtcgaacctgaagctggca
gcgctgtcgacgacggacggcctgacgggcattaccaaccggcgcggcttcgacacgcag
ctggcgaccgaatggcggcgcgccgcccgcaccggccagccgctggccttgctggtgctg
gacgtggactacttcaagaagtacaacgaccgctacggccacgtcgcgggcgacgcctgc
ctgcgcacggtggccgagctgctgacgcgccatgcgcgccgcaccacggatctggcggca
cgctatggcggcgaggaattcgtgctgctggcggccgccacggacgccaccgacgcgatg
cagacggcgcaagccatctgcaccgagctggcgggcctggaggtggaacacgacgagtcg
ccgttcggccgcgtcaccatcagcatcggcgtggccgtgcaggtaccgcacgagcatggc
gatccggacgacctggtgcggcgcgccgaccgcgcgctgtaccgcgccaagatccgcggc
cgcaaccaggcgatgctggcgacggagcactga
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