Pseudoduganella armeniaca: C9I28_00235
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Entry
C9I28_00235 CDS
T05378
Name
(GenBank) peptidase C39
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
masz
Pseudoduganella armeniaca
Pathway
masz02010
ABC transporters
masz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C9I28_00235
03070 Bacterial secretion system
C9I28_00235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
masz02000
]
C9I28_00235
02044 Secretion system [BR:
masz02044
]
C9I28_00235
Transporters [BR:
masz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
C9I28_00235
Secretion system [BR:
masz02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
C9I28_00235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_22
ABC_ATPase
AAA_21
AAA_16
SbcC_Walker_B
NB-ARC
AAA_29
BON_like
MobB
Motif
Other DBs
NCBI-ProteinID:
AVR94309
UniProt:
A0A2R4C3W9
LinkDB
All DBs
Position
complement(52429..54570)
Genome browser
AA seq
713 aa
AA seq
DB search
MQEKFSHTAVQCLTAIAQHHGLQINPERLVEDFALRAEEPGTAQILRMANEIGLKAKRAT
ISWDALLGQQGVYPLIGRLDNGNSVIIVGAKPDDGGKIAILDPLEERAGIMLLNREQFAS
RWKGEVIFVKRQHALTDPSQPFSLRWFIPEILKQKAAFRDIAIAAIAMHFLALASPIFFQ
LVIDKVLVHQSISTLSVLGVGIVCALAFDAAFSFLRQILMLGASNKIDMRLTRRTFGHLL
SLPIDYFETTTAGVITRHMQQLEKIRAFLTGRLFFTALDATALVIFLPILFTYSVKLAMI
TLAFTVLIALVVALMVPPYQRRLNDLYSAEGKRQGMLVETVHGMRTVKALAIEPAQRKAW
DQRSAESINTHFRVGQISIAGNTIVDFLGKLLPVIIIIIGAQDVFEQTLSVGALIAFQMI
TSKVTTPLISIVGLINEYQETALSVKMLGEVMNRAPEGRAGAGGLRPQLEGDITFDQVTF
RYPGAANNALDRASFTIKAGTVVGVVGRSGSGKTTLTKLIQGLYPVPEGIVRFDGIDARE
IELSHLRRQIGVVLQENFLFRGTVRENISATKPDATFEEIVEAAAAAGADEFIERMPQGY
DTLLEENASNLSGGQKQRLSIARSLLAKPRILILDEAASALDPESEAIFIKNLSRIAVGR
TVVMISHRLSTLVNADTILVMQRGTLVDSGRHEELLQRSDTYQHLWNQQTSHL
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaaattttcccataccgctgtacagtgcctgactgcgatcgcgcagcaccat
ggcctgcagatcaatcccgagcgcctggtcgaagacttcgcgctgcgggcggaagagccg
gggactgcgcagatcctgcgcatggcaaacgagatcggcctgaaggccaagcgcgccacc
atcagctgggatgcgctgctgggccagcagggcgtgtacccgctgatcggccgtctcgac
aatggcaattccgtcatcatcgtcggcgccaagccggacgacggcggcaagatcgccatc
ctcgatccgctcgaggaacgggccggcatcatgctgctcaaccgcgagcagttcgcctcg
cgctggaaaggcgaggtcatcttcgtcaagcgccagcatgcgctgaccgaccccagccag
ccgttcagcctgcgctggttcatccccgagatcctgaagcagaaggcggccttccgcgac
atcgccatcgccgcgatcgcgatgcacttcctggcgctggcctcgccgatcttcttccag
ctcgtcatcgacaaggtgctggtgcaccagagcatcagcacgttatccgtgctgggcgtg
ggcatcgtctgcgcgctggcgttcgatgccgccttcagtttcctgcgccagatcctgatg
ctgggcgccagcaacaagatcgacatgcggctgacccggcgcacgttcggccacctgctg
tcgttgccgatcgattatttcgagaccaccacggccggcgtcatcacgcgccacatgcag
cagctggaaaagatccgcgcgttcctgaccgggcgcctgttcttcacggcgctggacgcg
acggcgctggtgatcttcctgccgatcctgtttacctattccgtcaagctggccatgatc
acgctggccttcacggtgctgatcgcgctggtggtggcgctgatggtgccgccgtaccag
cgtcgcctgaacgacctgtactcggccgagggcaagcgccagggcatgctggtcgagacg
gtgcacggcatgcgtaccgtcaaggcactggccatcgagccggcccagcgcaaggcctgg
gaccagcgttcggccgagtcgatcaacacccacttccgcgtgggccagatctcgatcgcc
ggcaataccatcgtcgacttcctgggcaagctgctgccggtgatcatcatcatcatcggc
gcgcaggacgtgttcgagcagaccttgtcggtgggcgcgctgatcgcgttccagatgatc
accagcaaggtcacgacgccgctgatctccatcgtcggcctgatcaacgagtaccaggaa
accgcactgtcggtgaagatgctgggcgaggtgatgaaccgcgcgccggaaggccgcgcc
ggtgccggcggcctgcgcccccagctggaaggcgacattaccttcgaccaggtgacgttc
cgttatccgggcgccgccaacaacgcgctggaccgcgccagcttcacgatcaaggccggc
accgtcgtcggcgtggtgggccgcagcggctcgggcaagacgacgctgaccaagctgatc
cagggcctgtatccggtgccggaaggcatcgtccgcttcgacggcatcgatgcccgcgag
atcgagctgagccacctgcgccgccagatcggcgtcgtgctgcaggagaacttcctgttc
cgcggcaccgtgcgcgagaacatctcggccaccaagcccgatgccacgttcgaggagatc
gtcgaggcggccgccgcggccggtgccgacgaattcatcgagcgcatgccgcagggctac
gacacgctcctggaagagaacgcctccaacctctccggcggccagaagcagcgcctgtct
atcgcccgctcgctgctggccaagccgcgcatactgatcctggacgaagcggccagcgcg
ctggacccggaaagcgaggcgatcttcatcaagaacctgtcgcgcatcgcggtcggccgc
accgtcgtgatgatctcgcaccgcctctcgaccctggtcaacgcggacaccatcctcgtg
atgcagcggggtacactggtcgacagtggccggcacgaggaactgctgcagcgcagcgac
acctatcagcacttatggaaccagcaaacaagtcatctgtaa
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