Pseudoduganella armeniaca: C9I28_00760
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Entry
C9I28_00760 CDS
T05378
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
masz
Pseudoduganella armeniaca
Pathway
masz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C9I28_00760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
masz03400
]
C9I28_00760
Enzymes [BR:
masz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C9I28_00760
DNA repair and recombination proteins [BR:
masz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C9I28_00760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
PriA_3primeBD
AAA_30
Zn_ribbon_6
ADDB_N
nSTAND_NTPase5
AAA_25
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AVR94400
UniProt:
A0A2R4C489
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Position
complement(169785..171671)
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AA seq
628 aa
AA seq
DB search
MGLIVAIADTTDVPADKLKDALAVRSQLAPLSPQWIALAGFAAEYYQRPLGEVALPGVPK
NLRVTTTVALDRAIKKLAKLADTHDPAPVGMPTLNPEQQAAADAIGGAQGFAPTLLYGVT
GSGKTEVYLQACAQVLAREPAGQILILVPEINLTPQLEANIRTRFPGVMLATLHSSLSEG
ERMLHWLAAHQGQARIVLGTRLAILASLPHLKLIVIDEEHDPSYKQQEGLRYSARDLAVW
RGWQLKIPVVLGSATPSLETWHHALAKRYRKLELRQRAVSQATLPAVKLINLEHDKPRDG
LTQPLIDALKLRLERGEQSLLFLNRRGYAPVICCESCGWISDCQRCTAFMVLHKGEHKLR
CHHCSLEMRIPRHCPTCGNIDLQPLGRGTQRVEEGLQAMFPAARILRIDADSTRRKGSAQ
EAFDTVHRGDVDILIGTQMVAKGHDFKKLTLVGILNPDTALFSHDYRASERLFAQLMQVA
GRAGRTAQTDGGSASEVLVQTRYPEHPLYGAIVRHDYDRFATALLAERAQAGLPPYLYQA
MLRAEAPELAKALEFLAAARDCVPHEGITINDPIPMSMTRVYNVDRAQLLVESPSRPALQ
AFLKEWMTRLREMKSRVKWSLEVDPVDI
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgatcgtcgccatcgccgacacgaccgacgttccggcggacaagctcaaggac
gctctcgcggtacgcagccaactggcgccgctgtcgccgcaatggatcgcgctggccggc
ttcgcggccgagtactaccagcgccccttgggcgaggtggcattgcccggcgtgccgaag
aacctgcgcgtgacgaccaccgttgcgctggaccgggcgatcaagaagctggccaagctg
gccgatacccacgatccggcgccggtcggcatgcccacgctcaatcctgagcagcaggct
gccgcggatgcgatcggcggcgcgcagggcttcgcgcccaccttgctgtacggcgttacc
ggcagcggcaagacggaggtctacctgcaggcctgcgcacaggtgctggcacgcgaacct
gccgggcagatcctgatcctggtcccggaaatcaacctgacgccgcaactggaagcgaac
atccgcacgcgctttcccggcgtgatgctggccacgctgcacagcagcctgtccgaaggc
gagcgcatgctgcactggctggccgcgcaccagggccaggcccgcatcgtgctgggtacc
cggctcgccatcctggcttcgctgccgcacctgaaactgatcgtcatcgacgaggaacac
gacccctcctacaagcagcaggaagggctgcgctattccgcgcgcgacctggccgtgtgg
cgtgggtggcagttgaagatcccggtggtgctgggctccgcgacaccgtcgctggaaacc
tggcaccacgcgctggccaaacgctaccgcaagctggaactgcgccagcgcgccgtcagc
caggccacgctgccggccgtcaaattgatcaacctggagcacgacaagccgcgcgacggc
ctgacccagccgctgatcgatgccctgaaactgcgcctggaacggggcgagcaatcgctg
ttgttcctgaaccggcgtggctatgcaccggtgatctgctgcgagtcgtgcggctggatc
agcgactgccagcgctgcacggcgttcatggtgctgcacaagggcgagcacaagctgcgc
tgccaccactgcagcctggagatgcgcatcccgcgccattgtccgacctgcggcaatatc
gacctgcagccgctgggccgcggcacgcagcgggtggaggagggcttgcaggcgatgttc
cccgcggcgcgcatcctgcgcatcgatgccgactccacgcgccgcaagggcagcgcgcag
gaggcgttcgacacggtgcaccggggcgacgtggacatcctgatcggcacgcagatggtc
gccaagggccacgatttcaaaaagttgaccctggtcggcattttgaatcccgacacggcg
ctgttctcgcacgactaccgcgccagcgaacgcctgttcgcgcagctgatgcaggtggcg
ggccgcgccggccgcacggcgcagaccgatggcggcagcgccagcgaagtgctggtgcag
acgcgctatccggagcatccgctgtacggcgccatcgtgcggcacgactacgaccgcttc
gccacggcgctgctggcagagcgcgcgcaggccggcctgccgccctacctgtaccaggcc
atgctgcgggcggaagcgccggaactggccaaggcgctggagttcctggcggccgcgcgc
gactgcgtaccgcacgagggcatcacgatcaacgacccgatcccgatgagcatgacgcgg
gtgtacaacgtcgaccgcgcgcaactgctggtggagtcgccgtcgcgcccggccctgcag
gcgttcctaaaggagtggatgacgcgcttgcgcgagatgaagtcgcgggtgaagtggtcg
ctggaagtcgatccggtggatatctga
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