Pseudoduganella armeniaca: C9I28_03120
Help
Entry
C9I28_03120 CDS
T05378
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
masz
Pseudoduganella armeniaca
Pathway
masz00061
Fatty acid biosynthesis
masz00071
Fatty acid degradation
masz01100
Metabolic pathways
masz01212
Fatty acid metabolism
masz02024
Quorum sensing
masz04146
Peroxisome
Module
masz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
C9I28_03120
00071 Fatty acid degradation
C9I28_03120
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
C9I28_03120
09145 Cellular community - prokaryotes
02024 Quorum sensing
C9I28_03120
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
masz01004
]
C9I28_03120
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
masz04147
]
C9I28_03120
Enzymes [BR:
masz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
C9I28_03120
Lipid biosynthesis proteins [BR:
masz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
C9I28_03120
Exosome [BR:
masz04147
]
Exosomal proteins
Exosomal proteins of breast milk
C9I28_03120
Exosomal proteins of breast cancer cells
C9I28_03120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AVR94816
UniProt:
A0A2R4C5C0
LinkDB
All DBs
Position
698578..700275
Genome browser
AA seq
565 aa
AA seq
DB search
MEKIWLKSYPPGVPAEIDPNQYRSLVHLLEDAFHKFGNRKAFVCMDKAITYAELDAYSKR
LGAWLQSRGMKPGARVAVMMPNVLQYPIAIAAVLRAGYTVVNVNPLYTPRELEHQLTDAG
AEAIVILENFAHTLEQVLPRTSVKHIIVASMGEMLGGLKGAIVNFVVRNVKKMVPAYSLP
NAVRFKAALAHASAMKLTPVELGHEDVAFLQYTGGTTGVAKGATLTHRNIIANVLQSEAW
SQPGVQKEPRVEELSIVCALPLYHIFALTACALWGMRMGALNILIPNPRDIPGLIRELGK
YKFNILPAVNTLYNALVNHPGFRHLDFSGLKMANGGGMAVQKAVNDKWLAATGVSIIEGY
GLSETSPVATCNRSDSTAFTGTIGLPLPSTEIAILDDDGNEVPLGQPGEIAIRGPQVMRG
YWNRPDETAKVMTPDGFFKSGDVGIMDETGYTRIVDRKKDMILVSGFNVYPNELESVVAT
HPGVLECACIGVPDEHSGEAVKLFVVRKDPNLTIDELMAYCKDNLTGYKKPKYIEFRDEL
PKTNVGKILRRALRDEMTAGAKKAA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatctggttgaagtcgtacccgcccggcgttcctgccgagatcgatccgaat
cagtaccgctccctggtacatctgctggaagatgccttccacaagttcggcaaccgcaag
gcctttgtctgcatggacaaggccatcacctacgccgaactggacgcctattcgaagcgc
ctgggcgcctggctgcaaagccgcggcatgaagccgggcgcgcgcgtggcggtgatgatg
ccgaacgtgctgcaatacccgatcgccatcgccgccgtgctgcgcgccggctataccgtc
gtcaacgtcaatccgctctacacgccgcgcgagctggagcaccagctgaccgacgccggc
gccgaagccatcgtcatcctggagaatttcgcgcacacgctggagcaggtgctgccgcgc
acgtcggtcaagcacatcatcgtggcgagcatgggcgaaatgctgggcggcctgaaagga
gcgatcgtcaatttcgtcgtgcgcaacgtcaagaagatggtgccggcctactcgctgccc
aatgccgtgcgcttcaaggccgcgctggcccacgcctcggcgatgaagctgacccccgtc
gagctgggccatgaggacgtcgccttcctgcagtacacgggcggcacgaccggcgtcgcg
aaaggcgccaccttgacgcaccggaacatcatcgccaacgtgctgcaatcggaagcgtgg
tcccagccgggcgtgcagaaggagccgcgcgtcgaggagctgtcgatcgtctgcgcgctg
ccgctgtatcacatcttcgcgctgaccgcgtgcgccctgtggggcatgcgcatgggcgcg
ctgaacatcctgattccgaacccgcgcgacattcccggcctgatccgcgagctgggtaaa
tacaagttcaacatcctgccggccgtgaacacgctgtacaacgcgctcgtcaaccatccc
ggcttccgccacctggacttttccggcctgaagatggccaacggcggcggcatggccgtg
cagaaggccgtcaacgacaagtggctggccgcgacgggcgtgtcgatcatcgagggctac
ggcctgtccgagacgtcgccggtggcgacctgcaatcgctccgacagcaccgcgtttacc
ggcacgatcggcctgccgctgccgtccaccgaaatcgccatcctggacgacgacggcaac
gaagtcccgctgggccagccgggcgaaatcgccattcgcgggccgcaggtgatgcgcggc
tactggaaccggccggacgaaacggccaaggtcatgacgccggacggcttcttcaagtcg
ggcgacgtgggcatcatggacgaaacgggctacacccgcatcgtcgatcgcaagaaggac
atgatcctggtctccggcttcaacgtgtatccgaacgaactggaatcggtcgtggcgacc
cacccgggcgtgctggaatgcgcgtgcatcggcgtgccggacgagcactccggcgaggcc
gtcaagctgttcgtcgtgcgcaaggacccgaacctgacgatcgacgagctgatggcctac
tgcaaggacaacctgaccggctacaagaaaccgaagtacatcgagttccgcgacgaactc
ccgaaaaccaatgtcggcaagatcctgcgccgcgccctgcgcgacgagatgacagccggc
gccaagaaggcggcataa
DBGET
integrated database retrieval system
