Pseudoduganella armeniaca: C9I28_03125
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Entry
C9I28_03125 CDS
T05378
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
masz
Pseudoduganella armeniaca
Pathway
masz00061
Fatty acid biosynthesis
masz00071
Fatty acid degradation
masz01100
Metabolic pathways
masz01212
Fatty acid metabolism
masz02024
Quorum sensing
masz04146
Peroxisome
Module
masz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
C9I28_03125
00071 Fatty acid degradation
C9I28_03125
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
C9I28_03125
09145 Cellular community - prokaryotes
02024 Quorum sensing
C9I28_03125
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
masz01004
]
C9I28_03125
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
masz04147
]
C9I28_03125
Enzymes [BR:
masz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
C9I28_03125
Lipid biosynthesis proteins [BR:
masz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
C9I28_03125
Exosome [BR:
masz04147
]
Exosomal proteins
Exosomal proteins of breast milk
C9I28_03125
Exosomal proteins of breast cancer cells
C9I28_03125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AVR94817
UniProt:
A0A2R4C5B7
LinkDB
All DBs
Position
700367..702037
Genome browser
AA seq
556 aa
AA seq
DB search
MEKIWLKSYPEGVPAEIDCTQYRSVTHLLEDSFRKYANQNACVCMDKFLTYAQLDQMSQK
FGAWLQGKGLKPGARVAIMLPNVLQYPVVMAGILRAGYTVVNVNPLYTPRELEHQLKDSG
SEAIVVLENFATTVQEVLHHTPVKHVVVASMGDLLGGIKGAIVNFAVRHVKKMVPAYSLP
GAIPFKQVLAEGSRMTLSPVKTGHDDIAFLQYTGGTTGVSKGAMLTHRNIIANVLQNDAW
LQMKPGSEQLVFVCALPLYHIYSLTISALMSMRVGGLNVLIPNPRDIPGFVKELAKYRVT
VFPAVNTLYNALLNNPDFHKLDFSSYKICNGGGMAVQQAVADRWLKVTGTPIIEGYGMSE
TSPVATANRIDIKEFTGTIGLPISSTDIAILDDDGNELPLGATGEIAIRGPQVMAGYWQR
PDETAKSMTPSGYFKTGDVGIMDERGYTRIVDRKKDMIIVSGFNVYPNEVEGVVAAHPGV
LECACIGVPDKNSGEAVKLFVVRKDPNLTAEQLLDFCKHELTAYKKPKYIEFRDELPKTN
VGKILRRQLRDEKQAA
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatctggttgaaatcctaccctgaaggcgtaccggccgaaatcgactgcacg
cagtaccgctcggtcacgcacttgctggaggattcgttccggaagtacgcgaaccagaac
gcgtgcgtgtgcatggacaagttcctgacctatgcgcagctggaccagatgtcgcagaag
ttcggtgcctggctgcagggcaagggcctgaagccgggcgcgcgcgtcgccatcatgctg
ccgaacgtgctgcagtacccggtggtgatggccggcatcctgcgcgccggctacacggtc
gtcaacgtcaatccgctgtacacgccgcgcgagctggaacaccagttgaaggactccggc
tcggaagccatcgtcgtactggaaaacttcgccaccaccgtgcaggaagtgctgcaccac
acgccggtcaagcacgtcgtcgtcgcctcgatgggcgacctgctgggcggaatcaagggc
gccatcgtcaacttcgccgtgcgccacgtgaagaagatggtgcccgcctattcgctgccg
ggcgccatcccgttcaagcaggtcctggccgaaggcagccgcatgacgctctcgccggtg
aagacgggccacgacgacatcgccttcctgcagtacacgggcggcaccacgggggtgtcg
aaaggcgcgatgctcacgcaccgcaatatcatcgccaacgtgctgcagaacgatgcttgg
ctgcagatgaagccgggcagcgagcagctggtgttcgtctgcgcgctgccgctgtaccac
atctactcgctgacgatcagcgcgttgatgagcatgcgcgtgggcggcttgaacgtgctg
atcccgaacccgcgcgacatccccggcttcgtcaaggagctggccaagtaccgtgtcacc
gtgttcccggccgtgaatacgctctacaacgcgctgctgaacaacccggacttccacaag
ctcgatttttccagctataagatctgcaacggcggcggcatggccgtgcagcaggccgtc
gcagaccgctggctgaaggtgacgggcacgccgatcatcgaaggctacggcatgtccgaa
acgtcgccggtggccactgccaaccgcattgacatcaaggaattcacgggcacgatcggc
ctgccgatctcgtcgaccgacatcgccatcctggacgacgacggcaatgaattgccgctg
ggcgcgaccggcgagatcgccatccgcggcccgcaggtgatggccggctactggcagcgt
cccgacgagacggccaagtcgatgaccccaagtggctacttcaagaccggcgacgtcggt
atcatggacgagcgcggctacacccgcatcgtcgaccgcaagaaggacatgatcatcgtc
tccggcttcaacgtttacccgaacgaggtggaaggcgtcgtggccgcgcacccgggcgtg
ctggaatgcgcctgcatcggcgtgccggacaagaactcgggcgaagcggtaaaactgttc
gtggtgcgcaaggacccgaacctgacggccgagcaactgctggacttctgcaagcacgag
ctgacggcctacaagaagccgaagtacatcgagttccgcgatgagctgccgaagacgaac
gtgggcaagatcctgcggcgccagctgcgcgacgaaaagcaggcggcgtaa
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