Pseudoduganella armeniaca: C9I28_04105
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Entry
C9I28_04105 CDS
T05378
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
masz
Pseudoduganella armeniaca
Pathway
masz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C9I28_04105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
masz03400
]
C9I28_04105
Enzymes [BR:
masz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
C9I28_04105
DNA repair and recombination proteins [BR:
masz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C9I28_04105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
AVR94989
UniProt:
A0A2R4C5U6
LinkDB
All DBs
Position
924382..925902
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AA seq
506 aa
AA seq
DB search
MSIDGEPGDADDTAAPVDAVALALAGHPIPVATFGDFRTAARDLIVRRVPPESVQWSGSE
TPHGDLLSAATSGLAPSLPPGLLAQPPAPPPRIPRSLMEMLQSAACYRAPDRWAFLYKIV
WRWQQGQQEILSMADEDGARLQHMVKAVRHEEHDMHAYLRFRERPPEAGDPRFVAWFEPA
HDVLPQVAQHFARRMGKTSWMIGTPEATVLWDGHTLHSTGPLMRSAADVEDSGEALWLTY
YRSIFNPARLNADIMHGHIRTRFWKNLPEAAVVPHMVSQAAAGARKVGQLDTVGKRGGTT
IPIAAEKAAPERQQPSSLDDCRRCDLWQNATQAVAGQGARHAKIMLLGEQPGDQEDLAGK
PFVGPAGALLDKAMIDAGMDRRKVYITNAVKHFKWEPRGKRRLHKTPAQKEVMACHYWLE
TELETIAPDIVVALGSTALKSILQSGSVTMKDYMGQPFQHDGRWVVVTYHPSYALRVPSA
EARHEAVAAIVAALKLAQRLADGEQP
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgacggcgaaccgggcgacgccgacgataccgcggcgcccgtcgatgccgtc
gcgctggcactggccggccacccgatccccgtcgccacattcggcgactttcgcacggcc
gcgcgcgacctgatcgtgcgccgggtcccgcccgaatccgtacaatggtccggcagcgaa
acgccgcatggcgatttgctcagcgcggccacgtcgggcctggcgcccagcctgccgccc
gggttgctggcgcagccgccggccccgccgccgcgcattccccgcagcttgatggaaatg
ctgcaaagcgccgcctgctaccgcgccccggaccgctgggcgttcctgtacaagatcgta
tggcgctggcagcagggacaacaggagatcctgtcgatggccgacgaagacggcgcgcgc
ctgcagcacatggtgaaagcggtgcgccacgaggaacacgatatgcatgcctacctgcgc
tttcgcgaacgaccgccggaagcgggcgatccgcgcttcgtggcgtggttcgaaccggcg
cacgacgtgctgccgcaggtggcccagcatttcgcccggcgcatgggcaagaccagctgg
atgatcggcacgcccgaggccaccgtgctgtgggacggccacacgctgcacagcaccggg
ccgctgatgcgcagcgcagcggacgtggaggacagcggcgaggcgctgtggctgacctac
taccgcagcatcttcaaccccgcccgcctgaacgcggacatcatgcatggtcatatccgc
acgcgcttctggaaaaacctgccggaagcggccgtggtgccgcacatggtgtcgcaggcc
gccgccggcgcgcgcaaggtgggccagctcgacacggtgggaaaacgcggcggcaccacg
atcccgatcgcggccgagaaggcagcaccggagcgccagcaacccagctcgctggacgac
tgccgccgctgcgacctgtggcagaacgccacgcaggcggtggcggggcagggcgcccgc
cacgccaagatcatgctgctgggcgaacagccgggcgaccaggaggacctggccggcaag
cccttcgtcggcccggccggcgccctgctggacaaggcgatgattgatgcaggcatggac
cgcaggaaggtctacatcaccaacgcggtcaagcatttcaagtgggagccacgcggcaag
cgccgcctgcacaagaccccggcgcagaaggaagtgatggcctgccactactggctcgaa
acagagctggaaacgatcgcgccggacatcgtcgtcgcgctgggcagcacggcgctgaag
tcgatcctgcagtcgggcagcgtgacgatgaaggactacatggggcagccgttccagcac
gacgggcgctgggtcgtggtcacctatcacccgtcgtatgcactgcgcgtgccgagcgcc
gaggcgcggcatgaggcggtggcggcgattgtggcggccctgaaactcgcgcagcgcttg
gcggacggcgaacagccctag
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