Pseudoduganella armeniaca: C9I28_05755
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Entry
C9I28_05755 CDS
T05378
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
masz
Pseudoduganella armeniaca
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
masz03400
]
C9I28_05755
Enzymes [BR:
masz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
C9I28_05755
DNA repair and recombination proteins [BR:
masz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
C9I28_05755
Prokaryotic type
C9I28_05755
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AVR95285
UniProt:
A0A2R4C6Q6
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All DBs
Position
complement(1317642..1319063)
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AA seq
473 aa
AA seq
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MPISKSALVWFRRDLRAFDHAALHHALQAGGPVYCAFVFDTPILEGLPRDDRRVAFIHAS
LAELAAELEQMNGHLIVRHGDARAIIPALAAELDVATVFVNEDYDPAAIARDEAVASTLR
EAGRDLRAFKDQVVLAKAEVLSQAGKPLTVFTPYKNAWLKKLNLDPGLVAPLHVEPYAAA
FAPGRGTLPSLAQLGFDEVDLGAVGVTPGMTGGAAAFEEFLPKLAPYGTARDFPAVRGTS
QLSLHLRFGTVSIRHLVRTVRELAAHGQAGDGGAVWLAELVWREFYQQILFHFPYVVRSA
FKPVYDRIEWETGAQADELFAAWCEGRTGYPLVDAAMLQLNRTGFMHNRLRMVTASFLVK
DLGIDWRRGEAYFALKLNDYELASNNGGWQWAASSGCDAQPFFRIFNPVTQSQKFDADGA
FIKAFLPQLGQLNAKEVHAPWLAVGKVHDYPPPVVQHDVARARTLERFAVVKG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcctataagcaagagcgccctcgtctggtttcggcgcgacctgcgtgcgttcgaccat
gccgcgctgcatcacgccctgcaggcgggcggccccgtctactgcgccttcgtattcgac
acgccgatcctggagggactgccgcgcgacgaccgccgcgttgccttcatccacgcgtcg
ctggccgaactggcggcggagctggagcagatgaacggccacctgatcgtacgccacggc
gacgcgcgcgccatcatcccggcgctggcggcggagctggatgtggcgaccgtgttcgtc
aacgaggactacgacccggccgccatcgcgcgcgacgaggcggtggcgagcacgttgcgc
gaagccggccgcgacctgcgcgcgttcaaggaccaggtcgtcctggccaaggccgaagtg
ctgtcgcaggccggcaagccgctgaccgtgttcacgccgtacaagaacgcatggctgaaa
aaactcaacctggaccccggactggtcgcgccgctgcacgtggaaccctacgcggcggcc
ttcgcgcccggccgcggcaccctgccgtcgctggcgcagctgggcttcgatgaggtcgac
ctgggcgccgtcggcgttacaccgggcatgacgggtggcgcggccgcgttcgaagaattc
ctgcccaagctggcgccctacggcacggcgcgcgacttcccggccgtgcgcggcacctcg
caactgtcgctgcacctgcgcttcggcaccgtctcgatccgccacctggtgcgcacggtg
cgcgaactggccgcgcacggccaggccggcgacggcggcgccgtctggctggccgaactg
gtgtggcgcgagttctaccagcagatcctgttccactttccctacgtggtgcgttcggcg
ttcaagcccgtgtacgaccggatcgaatgggagacgggtgcgcaggcggacgagctgttc
gccgcctggtgcgagggccgaaccggctatccgctggtggacgcggccatgctgcagctg
aaccgcacgggcttcatgcacaaccggctgcgcatggtcacggccagcttcctcgtcaag
gacctcggcatcgactggcgccgcggcgaagcctacttcgcactgaagctgaacgactac
gagctggcgtcgaacaacggcggctggcaatgggccgcctcgtccggctgcgacgcgcag
ccgttcttccgcatcttcaatcccgtcacgcagtcgcagaagttcgatgcggacggtgcg
ttcatcaaggccttcctgccgcagctggggcagttgaacgccaaggaggtccatgcgccg
tggctggcggtgggcaaggtacatgattatccgccgccggtcgtgcagcacgacgtggcg
cgggcacgcaccttggagcggttcgcggtagtgaagggataa
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