Pseudoduganella armeniaca: C9I28_06590
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Entry
C9I28_06590 CDS
T05378
Name
(GenBank) Fis family transcriptional regulator
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
masz
Pseudoduganella armeniaca
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
masz03000
]
C9I28_06590
03036 Chromosome and associated proteins [BR:
masz03036
]
C9I28_06590
03400 DNA repair and recombination proteins [BR:
masz03400
]
C9I28_06590
Transcription factors [BR:
masz03000
]
Prokaryotic type
Helix-turn-helix
Other families
C9I28_06590
Chromosome and associated proteins [BR:
masz03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
C9I28_06590
DNA repair and recombination proteins [BR:
masz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
C9I28_06590
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_8
HTH_30
HTH_psq
CTXL_M
HTH_17
Phage_NinH
AIRC
Xre-like-HTH
A1_Propeptide
HTH_23
YpjP
Motif
Other DBs
NCBI-ProteinID:
AVR95424
UniProt:
A0A2R4C740
LinkDB
All DBs
Position
1491372..1491605
Genome browser
AA seq
77 aa
AA seq
DB search
MSKESIQEVVQKSLEEYFNDLGEQQASNIYDMVVMTVEKPILEVVMTRADGNQSHAAQML
GINRNTLRKKLQEHGLL
NT seq
234 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaaagtatccaggaagtcgtccagaaaagcctcgaagagtatttcaacgac
ctgggcgagcagcaggcatcgaatatctacgacatggtcgtcatgaccgtcgagaagccg
atcctcgaagtggtaatgacgcgcgccgacggcaaccagtcgcacgccgcgcagatgctc
ggtatcaaccgcaatacgttgcgcaagaaactgcaggaacacggcctgctgtaa
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