KEGG   Pseudoduganella armeniaca: C9I28_06715
Entry
C9I28_06715       CDS       T05378                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
masz  Pseudoduganella armeniaca
Pathway
masz03030  DNA replication
masz03410  Base excision repair
masz03420  Nucleotide excision repair
masz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:masz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    C9I28_06715
   03410 Base excision repair
    C9I28_06715
   03420 Nucleotide excision repair
    C9I28_06715
   03440 Homologous recombination
    C9I28_06715
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:masz03032]
    C9I28_06715
   03400 DNA repair and recombination proteins [BR:masz03400]
    C9I28_06715
Enzymes [BR:masz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     C9I28_06715
DNA replication proteins [BR:masz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     C9I28_06715
DNA repair and recombination proteins [BR:masz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     C9I28_06715
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C9I28_06715
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 FMN_red
Other DBs
NCBI-ProteinID: AVR95448
UniProt: A0A2R4C7C8
LinkDB
Position
1517250..1520000
AA seq 916 aa
MQKTLLLVDGSSYLYRAFHALPDLRSPDGHPTGAMHGMVNMLRRLRADYPAAYIACVFDA
KGKTFRDDLYPEYKATRASMPSDLSLQIEPIHEAVRAMGWPILMVDGVEADDVIGTLAVT
AEKNGMDVIISTGDKDLAQLVTPHVTLINTMSNEKLDEAGVLAKFGVPPNRIIDYLTLIG
DTVDNVPGVAKCGPKTAVKWLSQYDSLDGVIANADKITGAVGANLKAALDWLPKGRELIT
VKTDCDLSGHMMSISESLVAKDEDHESLLSFFTKYGFKTLLRELGAMTPSSKVPGQTTPA
APEGATGDMFAQPPANVKYDTVLTEAQLDEWIARIAAAELVSLDTETTSLEPMTAQLVGI
SLATEPGLACYIPVAHRYAGVPEQLPRELVLEKLKPWLEDAGKAKLGQNLKYDAHIFANH
GVTLRGVVHDTLLQSYVFESHRTHDMDSLAMRHLNHKTIPFEDVCGKGANMICFDQVELQ
RATDYAAEDADITLRLHLAMHGHVAGDEGLTAIYNKIELPTAVVLQKIERNGVLIDAGLL
ATQSEELGARIVELEQKAYELAEQPFNLGSPKQIGEIFFNKLKLPVVKKTPSGAPSTDEE
VLQKLAEDYPLPKILLEYRGMAKLKSTYTDKLPKMINPQTGRVHTNYAQAVAVTGRLASN
DPNLQNIPIRTAEGRRIREAFIAPPGSHLVSADYSQIELRIMAHISGDEAMLRAFAEGID
IHRATAAEIFGVPPSEVNSEQRRYAKVINFGLIYGMSAFGLAANLGIDRAAAQNYIDRYF
QRFAGVKQYMDETRLEAKANGYVKTVFGRRLWLPEINSPNGPRRQAAERAAINAPMQGTA
ADLIKLAMVAVQDWLEKENLKSRMIMQVHDELVLEVPDDELQLVRDTLPQLMAGVAQLKV
PLVAEVGVGRNWEEAH
NT seq 2751 nt   +upstreamnt  +downstreamnt
atgcaaaaaaccctgctgttagtcgacggttccagttacctctaccgtgccttccacgcg
ctgcccgacctgcgcagcccggacggccatccgaccggcgccatgcacggcatggtcaac
atgctgcgccgcctgcgcgccgactacccggccgcctacattgcttgcgtgttcgacgcc
aagggcaagaccttccgcgacgacctgtacccggagtacaaggccacgcgcgcgtcgatg
ccgtccgacctgtcgctgcagatcgagccgatccacgaggcggtgcgcgcgatgggctgg
ccgatcctgatggtcgacggcgtcgaggcggacgacgtgatcggcaccctggccgtcacg
gccgagaagaacggcatggacgtgatcatctccaccggcgacaaggacctggcccagctg
gtcacgccgcacgtcacgctgatcaatacgatgagcaacgaaaagctggacgaggcgggc
gtgctggccaagttcggcgtgccgccgaaccgcatcatcgactacctgaccctgatcggc
gacaccgtcgacaacgtgccgggcgtggccaagtgcggcccgaagacggccgtcaagtgg
ctgagccagtacgacagcctcgatggcgtgatcgccaacgcggacaagatcaccggtgcc
gtcggcgccaacctgaaggcggcgctggactggctgccgaaagggcgtgagctgatcacc
gtgaagaccgattgcgacctgtccggccacatgatgtcgatcagcgaatcgttggtcgcg
aaggacgaggaccacgagtcgctgctgagctttttcaccaagtacggcttcaagacgctg
ctgcgcgagctgggcgcgatgacaccgtcgtccaaggtgccgggacagaccacgccggcg
gcaccggaaggcgcgaccggcgacatgttcgcccagccgccggccaacgtgaagtacgac
acggtattgaccgaggcccagctggacgaatggatcgcccgtatcgcggcggcggaactg
gtgtcgctggacacggaaaccacgtcgctggagccgatgacggcgcagctggtcggcatt
tcgctggccacggaaccgggcctggcctgctacatcccggtcgcgcaccgctacgcgggc
gtgccggaacagctgccccgcgagctggtgctggaaaagctgaaaccgtggctggaagac
gcgggcaaggccaagctgggccagaacctgaaatacgacgcgcatatcttcgccaaccat
ggcgtgaccttgcgcggcgtggtgcacgacacgctgctgcaatcgtacgtgttcgagtcg
caccgcacgcacgacatggacagcctggcgatgcgccacctgaaccacaagaccatccca
ttcgaggacgtgtgcggcaagggcgccaacatgatctgcttcgaccaggtcgaactgcag
cgcgccaccgactacgccgccgaggatgcggacatcaccttgcgcctgcacctggcgatg
cacggccacgtggccggcgacgagggcctgacggcgatctacaacaagatcgagctgccg
acggccgtggtgctgcagaagatcgagcgtaacggcgtgctgatcgacgcgggcctgctg
gccacgcagtcggaagagctgggcgcgcgcatcgtcgaactggaacagaaggcctatgag
ctggccgaacagccgttcaacctgggctcgcccaagcagatcggcgagatcttcttcaac
aagctgaagctgccggtcgtcaagaagacgcccagcggtgcgccgtcgacggacgaggaa
gtgctgcagaagctggccgaggactatccgctgccgaaaatcctgctggagtaccgcggc
atggccaagctgaagtccacctacacggacaagctgccgaagatgatcaacccgcagacg
ggccgggtgcacacgaattatgcgcaggcggtggcggtcacgggccggctggcctcgaat
gacccgaacctgcagaacatcccgatccgcacggcggaagggcgccgcatccgcgaagcg
ttcatcgccccgccgggcagccacctggtctcggccgactattcgcagatcgagctgcgc
atcatggcgcacatctcaggcgacgaggcgatgctgcgcgcgttcgccgaaggcatcgac
atccaccgcgccaccgccgccgagatcttcggcgtgccccctagcgaggtgaacagcgag
cagcgccgctacgccaaggtgatcaacttcggcctgatctacggcatgagcgcgttcggc
ctggccgccaacctgggcatcgaccgcgccgccgcacagaactatatcgaccgttacttc
cagcgtttcgccggcgtcaagcagtacatggacgagacgcgcctggaagcgaaggcgaac
ggctacgtcaagacggtatttggccgccgcctgtggctgccggagatcaattcgccgaac
ggcccacggcgccaggccgccgaacgggccgcgatcaacgctccgatgcagggcacggcg
gcggacctgatcaagctggcgatggtcgccgtgcaggactggctggaaaaagaaaacctg
aagtcgcgcatgatcatgcaggtgcacgacgagctggtactggaagtgccggacgacgag
ctgcagctggtgcgcgatacgctgccgcagctgatggccggcgtggcgcagttgaaggtg
ccgctggtcgccgaagtcggcgtggggcggaactgggaggaggcgcactga

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