Pseudoduganella armeniaca: C9I28_07090
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Entry
C9I28_07090 CDS
T05378
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
masz
Pseudoduganella armeniaca
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
masz03021
]
C9I28_07090 (rpoH)
Transcription machinery [BR:
masz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C9I28_07090 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
AVR95517
UniProt:
A0A2R4C794
LinkDB
All DBs
Position
complement(1594432..1595325)
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AA seq
297 aa
AA seq
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MMSAPTALVPAGTSALGLGFSGNLGNLDAYISAVNRLPMLTHDEEVQLGRRLKDNNDLKA
AEKLVLSHLRLVVSIARGYLGYGLPHADLIQEGNIGLMKAVKRFDPDQGVRLVSYAMHWI
KAEMHEYILKNWRLVKVATTKAQRKLFFNLRSHKQGLDAMTPGQIDQLAKMLDVKREEVI
EMETRLSGRDIALESPTDDEDDKFAPIAYLSSDQNEPTKVLEAEQVTRLQSEGLETALSK
LDPRSRRIVEARWLANDDGSGATLHTLADEFGVSAERIRQIESAALKKMKGALAAYV
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccgcacctaccgccctggttccagccggcacgagtgctttgggcctcgggttc
agcggcaacctgggtaacctggatgcctacatttccgccgtgaatcgcctgccgatgctg
acgcacgacgaagaagtccagttgggccggcgcctgaaggacaacaacgacctgaaggcc
gccgagaagctcgtgctgtcgcacctgcgcctggtggtttcgatcgcccgcggctacctg
ggctacggcctgccgcacgccgatctgattcaggaaggcaatatcggcctgatgaaggca
gtcaagcgcttcgacccggaccagggagtccgtctggtgtcgtacgcgatgcactggatc
aaggctgaaatgcatgaatacatcctgaagaactggcgcctggtgaaagtggcgacgacc
aaggcacaacgcaagctgtttttcaacctgcgcagccataaacagggtctcgacgcgatg
acgccgggccagatcgaccagctggccaagatgctggacgtcaagcgcgaggaagtgatt
gagatggaaacccgcttgtcgggccgcgacatcgccctggaatcgccgaccgatgacgag
gacgacaagttcgctcccatcgcctacctgtcgtcggaccagaacgagccgaccaaggtg
ctggaagcggaacaggtcacgcgcctgcagtccgagggcctggaaacggcgctgtcgaag
ctggacccgcgctcgcgtcgcatcgtcgaagcgcgctggctggccaacgacgacggctcc
ggcgccaccctgcacacgctggcggacgagttcggtgtctcggccgagcgcatccgccag
atcgaatcggccgcgctgaagaaaatgaagggcgcgctggccgcctacgtataa
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