Pseudoduganella armeniaca: C9I28_08245
Help
Entry
C9I28_08245 CDS
T05378
Name
(GenBank) 23S rRNA pseudouridylate synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
masz
Pseudoduganella armeniaca
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
masz03009
]
C9I28_08245
Enzymes [BR:
masz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
C9I28_08245
Ribosome biogenesis [BR:
masz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
C9I28_08245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AVR95717
UniProt:
A0A2R4C7V3
LinkDB
All DBs
Position
1888330..1890270
Genome browser
AA seq
646 aa
AA seq
DB search
MNNTDKTNETGAQEVAAAAVKPKRRTKAQIEADNAALLAAGETPKPKRTRKTAASAEGAA
APAEVAAVADTAPVAAEAAPVKKPRGRAAKPAAVTPVEAAPVAVEPQQAPAAAPSEPAVS
GEKKARTPRGPRQMREQRALREVEKAERAEAAPAAEPVQEVVVAAEGAAAPERAGRGEGR
GEARNGKRKGKQGKPAQQAQGQQGQQGQQGQRRQGGNGGGKLSEADAVFSFVTSDAFDRD
EGARAKGPQKAARRDLTAEDDAPKLHKVLAEAGLGSRRDMEDLIVAGRVSVNGEPAHIGQ
RILPTDAVRINGKLIQRKVSKKPPRVLVYHKPAGEIVSHDDPDGRPSVFDRLPQMKVGKW
LAVGRLDFNTEGLLLFTTSGDLANRLMHPRYNIDREYAVRTLGVLEEGMRQKLLAGVELE
DGLAQFSKIADGGGEGVNKWYRVVIGEGRNREVRRMFEAVGLTVSRLIRTRYGALTLPSN
LKRGRWEEMEENTVRDLLAMVGVEKKQSGDGAAKGGNARGERNGNERGGEKRGREREQNF
NRLDVSNKNADPFPQAPRGARGGQGQGSYFGAGGTGRPGTAGRGQGFGRAGLGDQGGGRP
GQPAKARGPKQPDPLQTTFGFAAQPRRGGPPRGGAIDHGMPRRRKG
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacactgacaagaccaacgagaccggcgcgcaggaagtcgccgccgcagccgtc
aagccgaagcgccgcaccaaggcccagatcgaagcggacaacgcggcactgctggccgcc
ggcgagacgccgaagccgaagcgcacccgcaagaccgccgccagcgccgagggcgccgct
gcgccggccgaggtggccgccgtggccgataccgcaccggtcgctgccgaggcggccccc
gtgaagaagccgcgcggccgcgctgccaagccggccgccgtgacgccggtcgaggctgcg
ccggtcgccgtcgagccgcaacaggcgccggccgcggcgccgtccgagccggcggtgagc
ggtgagaaaaaggcgcgcacgccgcgtgggccgcgccagatgcgtgaacagcgcgcgctg
cgcgaagtggaaaaggccgagcgcgccgaagcggcgccggccgccgagccggtccaggaa
gttgtcgtggctgccgaaggcgccgcggcgccggaacgcgccggtcgtggcgagggccgt
ggcgaagctcgcaacggcaagcgcaagggcaagcagggcaaaccggcccagcaggcccaa
gggcagcagggtcagcaaggccagcaaggccagcgccgccagggcggcaacggcggcggc
aagctcagcgaagccgatgcggtgttctcgttcgtcacgtccgacgcgttcgaccgcgac
gagggtgcccgcgccaaggggccgcagaaggcggcgcgccgcgacctgacggccgaggat
gatgcgccgaagctgcacaaggtgctggcggaagcgggcctgggctcgcgccgcgacatg
gaagacctgatcgttgccggccgcgtgtccgtcaacggcgagccggcccatatcggccag
cgcatcctgccgacggatgccgtgcgcatcaacggcaaactgatccagcgtaaggtcagc
aagaagccgccgcgcgtgctggtgtaccacaagccggccggtgaaatcgtgtcgcacgac
gatccggacggccgtccgtccgtgttcgatcgcctgccgcagatgaaagtcggcaagtgg
ctggccgtcggccgcctcgacttcaacacggaaggcctgctgctgttcaccacgtccggt
gacctggccaaccgcctgatgcacccgcgctacaacatcgaccgcgaatacgccgtgcgc
acgctgggcgtgctggaagagggcatgcgccagaagctgctagccggcgtcgagctggaa
gacggcctggcgcagttctccaagatcgccgacggcggcggcgaaggcgtcaacaagtgg
tatcgcgtggtcatcggcgagggccgcaaccgcgaggtgcgccgcatgttcgaggcggtc
ggcctgacggtgtcgcgcctgatccgtacccgctatggcgcactgaccctgccgagcaac
ctgaagcgcggccgctgggaagagatggaagaaaacacggtgcgcgacctgctggcgatg
gtcggtgttgaaaagaaacagtccggcgacggcgccgccaagggcggcaatgcccgtggc
gaacgcaacggcaacgagcgtggcggcgaaaagcgcggtcgcgaacgcgagcagaacttc
aaccgcctggatgtcagcaacaagaacgccgacccgttcccgcaggcgccgcgcggcgcg
cgcggcggccagggccagggcagctatttcggtgccggcggcacgggtcgtcccggtact
gccgggcgtggccagggcttcggccgggccggcctgggcgaccagggtggcggccgtccg
ggccagccggccaaggcgcgcggtccaaagcagcccgatccgctgcagacgacgttcggt
ttcgccgcccagccacgccgcggcggcccgccgcgtggcggcgcgatcgaccacggcatg
ccgcggcggcgcaagggttga
DBGET
integrated database retrieval system
