Pseudoduganella armeniaca: C9I28_08270
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Entry
C9I28_08270 CDS
T05378
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
masz
Pseudoduganella armeniaca
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
masz03016
]
C9I28_08270
Enzymes [BR:
masz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
C9I28_08270
Transfer RNA biogenesis [BR:
masz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C9I28_08270
Prokaryotic type
C9I28_08270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AVR95722
UniProt:
A0A2R4C855
LinkDB
All DBs
Position
1896108..1897037
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AA seq
309 aa
AA seq
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MTQQKVKRVRDLVDGVLLLDKPVGLSSNDALIKAKRILNAKKAGHTGTLDPFATGLLPLC
FGEATKFSQDLLEADKTYVTTVHLGVRTDTGDTEGQVLETLPVDVTIEQIEAVLARFRGP
IAQVPPMYSALKRDGKPLYEYARAGVVLEREARNVTIHQLELLKYEAPFLQLEVTCSKGT
YIRVLGEDIGAALGCGAHLNALRRIGVGALRAEQMITAEQLVAHPAPLTLLAPVDALLSS
FPKVDLTPALAKRFLQGQRLPLGKEPEVVTPAPYEGRVRVYEGGRLLGTGVLGEWAILAP
ERLIAAAQG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagcagaaagtgaagcgggtgcgcgacctggtggacggcgtgctgctgctcgat
aaaccggtggggctgtcgtccaacgacgcgctgatcaaggccaagcgcatcctgaacgcg
aagaaggcgggccacaccggcacgctcgatccgttcgccacgggcctcctgccgctgtgc
ttcggcgaggccaccaagttctcgcaggacctgctggaggcggacaagacctacgtcacg
acggtgcacctgggcgtgcgcacggatacgggcgacaccgagggccaggtgctggagacg
ctgccggtggacgtgacgatcgaacagatcgaagccgtgctggcgcgcttccgtggtccc
atcgcgcaggtgccgccgatgtactcggcgctgaagcgcgacggcaagccgctgtacgaa
tacgcccgcgccggcgtggtgctggagcgcgaagcacgcaacgtgacgatccaccagctg
gagctgctcaagtacgaagcgccgttcctgcagctggaagtcacgtgcagcaagggcacg
tacatccgcgtgctgggcgaggacatcggcgccgcgctgggctgcggcgcccacctgaac
gcgctgcgccgtatcggcgtgggcgcgctgcgcgccgagcagatgatcacggcggagcag
ctggtggcgcacccggcgccgctgacgttgctggcgcccgtcgatgcgctgctgtcgtcg
ttcccgaaagtggacctgacgccggcgctggccaagcgcttcctgcagggccagcggctg
ccgctggggaaggagccggaggtggtcacgccagcgccgtacgagggccgtgtgcgggtg
tacgagggcgggcgcttgctgggtaccggcgtgctgggcgagtgggccatcctggcgcca
gagcgcctgatcgccgcggcgcaaggataa
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