Pseudoduganella armeniaca: C9I28_09210
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Entry
C9I28_09210 CDS
T05378
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
masz
Pseudoduganella armeniaca
Pathway
masz02010
ABC transporters
masz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C9I28_09210
03070 Bacterial secretion system
C9I28_09210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
masz02000
]
C9I28_09210
02044 Secretion system [BR:
masz02044
]
C9I28_09210
Transporters [BR:
masz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
C9I28_09210
Secretion system [BR:
masz02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
C9I28_09210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_16
AAA_29
AAA_22
AAA_18
NB-ARC
AAA_21
DUF87
PRK
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AVR95890
UniProt:
A0A2R4C8L0
LinkDB
All DBs
Position
complement(2102818..2105010)
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AA seq
730 aa
AA seq
DB search
MRDDAPYRTPPPFPGTEPPPPARLDSGVACLVLMARLHGVAADPDQLAHEFAPPGGALAT
SDLLLAAKKLDLKAKAVRTDATRLAKTPLPAIALGRDADGKPEYFILARIDSNEHGTQVL
IQSPTAGRPQTLTLEQLQQRWDGELVLIASRASLAGELAKFDFTWFIPAIVKYRKLLGEV
LLVSFVLQFFALITPLFFQVVMDKVLVHRGFTTLDVIAVGLVAVMLFEVALTTLRSYVFA
HTTSRIDVELGARLFRHLLALPLAYFQARRVGDSVARVRELENIRSFLTGNAITLVLDLL
FSVVFIAVMLSYSGWLSLIVILSLPCYVILSALFTPVLRARLNEKFARSAENQAFLVETI
SGIDTVKAMAVEPHWTRKWDNQLAAYVSSSFRTATIGTLAGSGVTLVSKLVTVATMYVGA
RLVIDNQMSVGQLIAFNMLAAQVAQPVMRLAQLWTDFQQTGISVQRLGDILNTRTEVAGN
KSPLPALAGQITLDDVVFRYRPDGPEVLKGVSLRIAPGEVIGIVGRSGSGKSTLTKLVQR
LYVPERGRVLVDGMDLALADSTSLRRQIGVVLQENVLFARSIRDNIALADPGAPLSAVIE
AAKLAGAHEFILELPEGYDTLVGEHGSSLSGGQRQRIAIARALMTDPRVLIFDEATSALD
YESERIIQNNMKAICRGRTVIVIAHRLSAVRDANRIVVMERGQVVETGRHAELLAIEGGH
YARLHGMQHG
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgacgacgctccttaccgcacgcccccaccgtttccgggtactgaaccgccaccg
ccagcgcgcctcgacagcggcgtggcctgcctggtgctgatggcgcgcctgcacggcgtg
gcggccgatcccgaccagttggcgcacgagttcgcaccgccgggcggcgcgctcgctacg
tccgacctgctgctggcggcaaaaaagctggacctgaaggccaaggccgtgcgcaccgac
gcgacgcggctggcgaaaacgccgctgccggccatcgcgctggggcgcgacgcggacggc
aagccggaatacttcatcctcgcgcgcatcgacagcaacgagcatggcacccaggtgctg
atccagtcgcccacggcggggcggccgcagaccttgaccttggagcagttgcagcagcgc
tgggacggcgagctggtactgatcgcgtcgcgcgcgtcgctggccggcgagctggcgaaa
ttcgacttcacctggttcatccccgccatcgtcaagtaccgcaagctgctgggcgaagtg
ctgctggtcagcttcgtgctgcagttcttcgccctgatcacgcccctgttcttccaggtg
gtgatggacaaggtgctggtgcaccgcggctttaccacgttggacgtgatcgccgtcggc
ctggtggccgtgatgctgttcgaggtggcgctgaccaccttgcgcagctacgtgttcgcg
cacaccaccagccgcatcgacgtggaactgggcgcgcggctgttccgccacctgctggcg
ctgccgctggcctacttccaggcgcgccgcgtgggcgactcggtcgcgcgcgtgcgcgag
ctggagaacatccgctccttcctgaccgggaatgccatcaccctggtgctggacctgctg
ttttccgtggtgttcatcgccgtcatgctcagctacagcggctggctcagcctgatcgtg
atcctgtccctgccctgctacgtgatcctgtcggcgctgttcacgcccgtgctgcgcgcg
cgcctgaacgagaagttcgcgcgcagcgcggagaaccaggccttcctggtggagaccatc
agcggcatcgacaccgtcaaggcgatggcggtggagcctcactggacgcgcaagtgggac
aaccagctggcggcctacgtgtcgtcgagctttcgcaccgcgaccatcggcaccctggcc
ggcagcggcgtcacgctggtctcgaagctggtgacggtggcgacgatgtacgtgggcgcc
cgcctcgtcatcgacaaccagatgtcggtcggccagctgatcgccttcaacatgctggcg
gcgcaggtggcgcagccggtgatgcggctggcgcagctgtggaccgatttccagcagacc
ggcatctcggtacagcgcctgggcgacatcctgaacacgcgcaccgaggtggccggcaac
aagagccccctgcccgcgctggccggccagatcacgctggacgatgtggtattccgctac
cgcccggacgggccagaagtgctgaaaggcgtctcgctgcggatcgcgccgggcgaagtg
atcggcatcgtcggacgctccggttcgggcaagagcactttgacgaagctggtgcagcgg
ctgtacgtgcccgagcgcggccgcgtgctggtggacggcatggacctggcgctggccgat
tcgacgtcgctgcgccggcagatcggcgtggtgctgcaggagaacgtgctgttcgcgcgc
agcatccgcgacaacatcgcgctagccgacccgggcgccccgctgtcggccgtgatcgag
gcggccaagctggccggcgcgcacgagttcattctcgaactgcccgagggttacgacacg
ctggtgggcgagcacggctcgtcgctgtccggtggccagcgccagcgcatcgccatcgcg
cgtgccttgatgacggacccgcgcgtgctgatcttcgatgaagccaccagcgcgctggac
tacgagagcgaacgcatcatccagaacaatatgaaggcgatctgccgcggccgcacggtg
atcgtcatcgcccaccgcctctcggccgtgcgcgatgccaaccgcatcgtcgtgatggag
cgcggccaggtggtggagacgggtcgccacgccgagctgctggcgatcgagggcggccat
tacgcgcgcctgcacggcatgcagcacggttaa
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