Pseudoduganella armeniaca: C9I28_09270
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Entry
C9I28_09270 CDS
T05378
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
masz
Pseudoduganella armeniaca
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
masz03032
]
C9I28_09270
03400 DNA repair and recombination proteins [BR:
masz03400
]
C9I28_09270
Enzymes [BR:
masz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
C9I28_09270
DNA replication proteins [BR:
masz03032
]
Prokaryotic type
DNA Topoisomerases
C9I28_09270
DNA repair and recombination proteins [BR:
masz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C9I28_09270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AVR95900
UniProt:
A0A2R4C8L8
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All DBs
Position
2120320..2122992
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AA seq
890 aa
AA seq
DB search
MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLFSMHESNYVHN
RPYVKCARVVGDTMGKYHPHGDSSIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGDAAAAM
RYTECRLDKIAGELLADIDKETVDFQPNYDGKEKEPTVLPTRVPNLLINGSSGIAVGMAT
NIAPHNLSEVINGALHVLANPACSVDELIELIPAPDFPTGGIIYGVSGVRDGYRTGRGRV
VMRAKTHFEEFGKEGGRTAIIVDELPYQVNKKSLLERIAENVRDKKLEGISDIRDESDKS
GMRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPKLMNLKELLATFLSHRR
EVVTRRTVFELRKARERGHVLEGLAVALANIDDFIAIIKAAPTPPLAKTELMARAWDSSL
VREMLARTGDEGQAGIEAFRPEHLPKHYGMQPDGLYKLSDDQAQEILQMRLQRLTGLEQD
KIVNEYKDVMAQIADLLDILAKPARVTAIIGDELNAAKLEYGAKDERRSTIEHNATDLET
EDLITPQDMVVTLSHMGYMKAQPISEYRAQKRGGRGKQAMATKDEDWIDQLFIANTHDYI
LCFSNRGRMYWLKVWEVPQGSRNSRGKPIVNMFPLQDNEKITVVLPLSGENRTFPEDHYV
FMSTSLGTVKKTPLKDFSNPRKAGIIAVDLDEGDFLIGAALTDGKHDVMLFSDSGKAVRF
DENDVRPMGRTARGVRGMNLEEGQNVIALLVAENEQQSVLTATENGYGKRTPITEYTRHG
RGTKGMIAIQTSERNGKVVAATLVDTTDEIMLITTGGVLIRTRVSEIREMGRATQGVTLI
AVEDGTKLSGLQRIVEADADEVELEPEGGAAAATPAAEPDTPAGDDPVAE
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggatcaattcgcaaaagaaacaatcccaatttccctcgaagaagagatgcgcaagagc
tacctcgattacgcgatgagcgtgatcgtgggccgcgccttgccggatgcacgcgacggc
ttgaagccggtgcaccgtcgggtgttgttctccatgcacgagagtaactacgtgcacaac
cgtccatacgtcaagtgcgcccgcgtcgtcggcgacacgatgggtaaataccacccgcac
ggcgactcgtcgatctacgacaccctggtgcggatggcccaggatttctcgctgcgctat
acgctggtggacggccagggcaacttcggttccatcgacggcgacgccgcggcagccatg
cgttacaccgagtgccgcctggacaagatcgccggcgagttgctggccgacatcgacaag
gaaaccgtcgacttccagccgaactacgacggcaaggaaaaagaaccgacggtgctgccc
acgcgcgtgccgaacctgctgatcaacggttcttccggtatcgcggtcggcatggcgacc
aacatcgcgccgcacaacctgtcggaagtgatcaacggcgccctgcacgtgctggccaac
ccggcctgctcggtcgatgagctgatcgaactgatcccggcgccggacttcccgaccggc
ggcatcatctatggtgtgtccggcgtgcgcgacggctaccgcacgggccgcggccgcgtc
gtcatgcgcgccaagacccacttcgaggaattcggcaaggaaggcggccgcaccgcgatc
atcgtcgacgagctgccgtaccaggtcaacaagaaatccctgctggagcgcatcgccgag
aacgtgcgcgacaagaagctcgaaggcatttccgacatccgcgacgagtccgataaatcg
ggcatgcgcgtggtgatcgaactgaaacgcggtgaagtgccggaagtggtgctgaacaac
ctgtacaagcagacccagttacaggacaccttcggcatgaacatggtcgcgctggtcgat
ggccagccgaagctgatgaacctgaaggaactgctggccacgttcctgtcgcaccgccgc
gaagtggtcacgcgccgcaccgtgttcgaactgcgcaaggcgcgcgagcgcggccacgtg
ctggaaggcctggcagtcgcgctggcgaacatcgacgacttcatcgccatcatcaaggcc
gcgccgacgccgccgctggcgaagacggagctgatggcgcgcgcctgggattcgtccctg
gtgcgcgagatgctggcccgtaccggcgacgaaggccaggccggcatcgaggcgttccgc
cccgagcacctgccgaagcactacggcatgcagccggacggcttgtacaagctgtccgac
gaccaggcccaggaaatcctgcagatgcgcctgcagcgcctgaccgggctggagcaggac
aagatcgtcaacgagtataaagacgtgatggcgcagatcgccgacctgctggacatcctg
gccaagccggcccgcgtcaccgccatcatcggcgacgaactgaatgccgccaagctggaa
tacggcgccaaggacgagcgccgctcgaccatcgagcacaacgccaccgacctggaaacg
gaagacctgatcacgccgcaggacatggtcgtgaccttgtcgcacatgggctacatgaag
gcccagccgatctccgaataccgcgcacagaagcgcggcgggcgcggcaagcaggccatg
gcgaccaaggacgaggactggatcgaccagctgttcatcgccaatacgcacgactacatc
ctgtgcttctccaaccgcggcaggatgtactggctgaaggtgtgggaagtgccacaaggc
tcgcgcaactcgcgcggcaagccgatcgtcaacatgttcccgctgcaggacaacgagaag
atcaccgtcgtgctgccgctgtcgggcgagaaccgcacgttcccggaagatcattacgtg
ttcatgtccaccagcctgggcaccgtcaagaagacgccgctgaaggacttctccaacccg
cgcaaggccggcatcatcgccgtggacctggacgagggcgacttcctgatcggcgccgcg
ctgaccgacggcaagcacgacgtgatgctgttctccgactccggcaaggcggtgcgcttc
gacgagaacgacgtgcgcccgatgggccgcacggcgcgtggcgtgcgcggcatgaacctg
gaagagggccagaacgtcatcgcgctgctggtcgccgaaaacgagcagcagtcggtgctg
acggccaccgagaacggctacggcaagcgcacgccgatcacggaatacacccgtcacggc
cgcggcaccaagggcatgatcgcgatccagacctccgagcgtaacggcaaggtcgtcgcc
gccaccctggtcgataccaccgacgagatcatgctgatcacgacgggcggtgtgctgatc
cgcacccgcgtctccgagatccgcgagatgggccgcgccacccagggcgtcaccctgatc
gcggtggaggacggcaccaagctgtccggcctgcagcgcatcgtcgaggcggacgcggac
gaggtggagctggagcccgaaggcggcgcggcggcggcaacgccagcggcggagccggat
acgccggctggcgacgaccccgtggccgagtaa
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