Pseudoduganella armeniaca: C9I28_09965
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Entry
C9I28_09965 CDS
T05378
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
masz
Pseudoduganella armeniaca
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
masz03000
]
C9I28_09965 (prpR)
Transcription factors [BR:
masz03000
]
Prokaryotic type
Helix-turn-helix
Other families
C9I28_09965 (prpR)
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA
AAA_2
HTH_psq
HTH_17
Xre-like-HTH
RWP-RK
HTH_23
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AVR96020
UniProt:
A0A2R4C8Z8
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Position
complement(2292009..2293700)
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AA seq
563 aa
AA seq
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MSTPALPLEQDKPVIWTVSVSRLAALLRDVTLEYDALATIEPINLGFDDAVRHIRERLAT
ERCDAVISAGSNAAWLKSRLSVPVVVAKASGYDMMQALARARRVVDSAQAKPEGTGSHPR
AERPADGSLSPVLIGVVTYQAPVPELAQFAETFGIGIVQRTYATEQDARAQIADLKAAGV
RAVVGAGLITDLAEEAGLTGVFVYSAASIRQAFDDALEIARLGQLEAQRHRTRGGAVPDT
LRARHGVADLRGASPAMEKVRQAAVLYARSAATVLIQGETGSGKELVAQAIHRESPRRLL
ANAPFVAVNCGALAESLLESELFGHEEGAFTGARRGGHAGLFEAANHGTLFLDEIGEMPL
ALQTRLLRVLEEREVVRVGGTRPVPVNVRIVSATHCDLEQRVRDGRFRADLFYRLAVLRL
TLPPLRERQDDIVPLAEWSLRNALAALGTRAAPNLAAELAACAPLLRAYAWPGNVRELRN
LAERLALFLAAEPLQALTPAFILDVAPELAGTRAATAAPVLPARESTADVLRRFGGRRDA
AAQYLGISRTTLWRRLREEGATA
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgagcactcctgccctgcccctggaacaagacaagcccgtcatctggacggtgtcggta
tcgcgcctggccgcgctgttgcgcgacgtcacgctggagtacgacgccctcgccaccatc
gagcccatcaacctcggcttcgacgacgccgtgcgccacatccgcgagcggctggccacc
gagcgctgcgacgccgtcatctcggccggctcgaacgcggcctggctgaaaagccgcctg
tcggtgccggtcgtcgtggccaaggccagcggctacgacatgatgcaggcgctggcgcgg
gcgcggcgggtggtcgactcggcgcaagcaaaacccgaggggacaggctcccatccgcgg
gccgagaggcccgcagatgggagcctgtccccggtactaataggtgtcgtgacgtaccag
gcgccggtacccgagctggcccagttcgcggaaacgttcggcatcggcatcgtgcaacgc
acctatgccaccgaacaggacgcgcgggcgcagatcgccgacctgaaggcggccggcgtg
cgcgccgtggtcggcgcaggcctgatcacggacctggccgaggaagcggggctgaccggc
gtgttcgtctactcggcggcctcgatccgccaggcgttcgacgacgcgctggagatcgcg
cgcctgggccagctggaagcgcaacggcatcgcacgcgcggcggcgcggtgccggacacg
ctgcgcgcccgccacggcgtggccgacctgcgcggcgcctcgccggcgatggaaaaggtg
cggcaggccgccgtgctgtatgcgcgctccgccgccacggtgctgatccagggcgagacg
ggcagcggcaaggagctggtggcgcaggcgatccaccgcgagagcccgcggcgcctgttg
gccaacgcgccgttcgtggcagtcaactgcggcgccctggccgagtcgctgctggagtcg
gagctgttcggccacgaggaaggcgcgttcacgggcgcgcgccgcggcggccacgccggc
ctgttcgaggcggccaaccatggcacgctgttcctcgacgagatcggcgaaatgccgctg
gcgctgcaaacgcgcctgctgcgcgtgctggaggagcgcgaggtggtgcgcgtcggcggc
acgcggcccgtgcccgtcaacgtgcgtatcgtcagcgccactcactgcgacctggaacag
cgcgtgcgcgacggccgcttccgcgccgacctgttctaccgcctggccgtgctgcgcctg
acgttgccgccgttgcgcgaacgccaggacgacatcgtgccgctggccgaatggtcgctg
cgcaatgcgctggcagcgctgggtacgcgcgccgcgcccaacctggcggcggaactggcg
gcgtgcgcgccgctgctgcgcgcctacgcctggccgggcaacgtgcgcgagctgcgcaac
ctggccgagcggctggccctgttcctggcagccgagccactgcaggcgctcacgccggcg
ttcatcctggacgtggcacccgaactggccggtacccgcgcggcgacagcggcaccggtc
ctgcccgcacgggaaagcacggcggacgtgctgcgccgcttcggcggccggcgcgacgcg
gcggcgcagtacctcggcatcagccgcacgacgctgtggcgccgcctgcgcgaggaaggg
gccacggcgtga
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