Pseudoduganella armeniaca: C9I28_10820
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Entry
C9I28_10820 CDS
T05378
Name
(GenBank) 3-methyladenine DNA glycosylase 2
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
masz
Pseudoduganella armeniaca
Pathway
masz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C9I28_10820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
masz03000
]
C9I28_10820
03400 DNA repair and recombination proteins [BR:
masz03400
]
C9I28_10820
Enzymes [BR:
masz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
C9I28_10820
Transcription factors [BR:
masz03000
]
Prokaryotic type
Helix-turn-helix
AraC family
C9I28_10820
DNA repair and recombination proteins [BR:
masz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C9I28_10820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AVR96155
UniProt:
A0A2R4C9A1
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All DBs
Position
complement(2485309..2486676)
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AA seq
455 aa
AA seq
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MDLTDRLSCHRAVQARDARFDGRFFVGVTSTGIYCRPICPARTPKLENCRFYPSAAAAQQ
AGFRPCLRCRPESAPGGGAWRGSSDTVACALALLAECDQQEEPVLAAVAARLDVSLRQLR
RLFQQHLGASPVAVLQTRRILVAKQLIHETSLPMTAVAMAAGFGSIRRFNETFQAMYGRP
PSALRRRAGSAADSAGEIVLRLRYRPPYDWPALLAALPVLPGVALAIDGEYRRTVRVGTV
RVWQEPARHNLHVGLRLDDIRRLPDMLARVARTFDTAADSAVIDAHLAADPLLAPLVTAR
PGLRVPGPWEPFEAAVLALLPPAALPDLLARCADPLLPALHLPGLTRLSPSPAGVAAADL
AGLAGLADHADRLQALQSLARAVERDPALLQPGSAPLAARLAALPGMGTSLAQHIAAAIG
SDGDTDTGTPPDRGEAWQPWRAYAQHHLSLTKEIA
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggaccttaccgatcgcctcagctgccaccgggccgtgcaggcgcgcgacgcgcgcttc
gacggccgcttctttgtcggggtgacgtcgaccggcatctactgccgcccgatctgcccg
gcgcgcacgcccaagctcgagaactgccggttctacccgtccgccgcagcggcccagcag
gcagggtttcgtccctgcctgcgctgccggcccgaatcggcgcccggtggcggcgcctgg
cgcggcagctccgatacggtggcatgcgcgctcgcgctgctggccgagtgcgaccagcag
gaggagccggtcctggccgccgtcgcggcccggctggacgtcagcctgcgccagttgcgc
cgcctgttccagcagcatctgggcgcctcgcccgtggcggtactgcagacgcgccgcatc
ctggtggccaagcagctgatccatgaaaccagcctgccgatgacggcggtggcgatggcg
gccggcttcggcagcatccgccgcttcaacgagaccttccaggccatgtacggccggccg
cccagcgcgttgcggcgccgcgccggcagcgccgccgacagcgccggcgaaatcgtgctg
cgcctgcgctaccggcctccctatgactggccggcgctgctggcggcgctgcccgtgctg
ccgggcgtcgcgctggcgatcgacggcgagtaccggcgtaccgtgcgtgtcggcacggtg
cgcgtttggcaggagccggcccggcacaacctgcacgtgggcttgcggctggacgatatc
cgcaggctgccggatatgctggcgcgcgtggcacgcacattcgacacggcggccgacagc
gccgtcatcgatgcccacctggcggccgacccgctgctggcaccgctcgtgacggcgcgt
cccgggctgcgcgtgcccggtccgtgggaacccttcgaggccgccgtgctggccctgcta
ccgccggcggccttgcccgacctgctggcacgctgcgccgacccgctgctgccggcgctg
catttgccagggttgacgcgcctgtctccttcgccggccggcgtcgccgccgccgacctg
gccgggctggccgggttggccgatcatgccgaccggctgcaggcgttgcaatcgctggcg
cgtgccgtcgagcgcgacccggcactcctccagccgggcagcgcgccgttggcggcacgc
ctggccgcgctgcccggcatgggcacctcactggcgcaacacatcgccgcggccatcggc
agcgacggcgacaccgacacgggtacgccgccggaccgcggcgaggcctggcaaccctgg
cgcgcctacgcccagcaccacctttcattgaccaaggagatcgcatga
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