Pseudoduganella armeniaca: C9I28_11720
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Entry
C9I28_11720 CDS
T05378
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18902
multidrug efflux pump
Organism
masz
Pseudoduganella armeniaca
Module
masz_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
masz02000
]
C9I28_11720
01504 Antimicrobial resistance genes [BR:
masz01504
]
C9I28_11720
Transporters [BR:
masz02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
C9I28_11720
Antimicrobial resistance genes [BR:
masz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
C9I28_11720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
PnpCD_PnpD_N
Motif
Other DBs
NCBI-ProteinID:
AVR99160
UniProt:
A0A2R4CI55
LinkDB
All DBs
Position
complement(2679853..2683089)
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AA seq
1078 aa
AA seq
DB search
MNFPRFFVDKPIFAAVLSIMIFVAGLIAIMRLPISEYPEVVPPSVVVRAQYPGANPKVIA
ETVAAPLEEQINGVENMLYMDSKATSDGALALTVTFKIGTNAEQAETQVQNRVQRALPRL
PEEVRQIGVTTAKSSPNLTMVAHLSSPKGRYDDVYLRNYAVLNVKDQLSRIPGMGEVILF
GAGDYAMRVWIDPQKLAARSMTAGDVVGAIREQNVQVAAGVVGASPTKGSEFQLTVNTTG
RLKTVEDFGNVIVRTNADGAVTLLRDVARVELGSNSYALRSLLNNKSAAAIGIFEAPGAN
ALQLSQDVRDTLAALSKDFPEDVEFSIVYDPTQFVRESIRAVIHTLLEAVALVVVVVIVF
LQTWRASIIPLLAVPVSIVGTFAVMLGFGFSINTLSLFGLVLAIGIVVDDAIVVVENVER
NIAAGLTPHDATIQAMREVSGPIIAIALVLCAVFVPIAFVSGLTGQFYRQFALTIAISTV
ISALCSLTLAPALSAALLRSHDAPKDALTRAMDRVFGPFFGWFNRFFGRASHAYGRGVQR
VMVRKGLGIGVYLVLTVAAVFVFRAVPSGFVPGQDKQYLVGFAQLPDAASLDRTDAVVRR
MSDIAKGVPGVMDSIAFPGLSINGFTNAPNAGIVFVGLKPFHERRSAELSGGAIAAEVNK
RLGAIQDAFIMVFPPPPVNGLGTIGGFKMMVEDRGNLGYDELYKATQALQMKAWQNPQLA
GVFSSYQINVPQLFADVDRTRAKQLGVPLATVYQTLQINLGSLYVNDFNQFGRTYQVVVQ
ADAPFRSQREQIAQLKVRNDRGEMIPLSSLMRISDTYGPDMVNRYNAYLAADISGGAAPG
VSSGQAQEAMSQLARETLPKGISFEWTDLTYQEILAGNTMVYVFPLCVLLVFLVLAAQYE
SWTLPLAVILIVPMSILCALLGVKLTGGDNNVFTQIALFVLVGLASKNAILIVEFARELE
DHGRNVVQAALEACRLRLRPILMTSIAFIMGVLPLVFSSGAGAEMRHAMGVAVFAGMLGV
TFFGLFLTPLFYVLLRTLALRLSHSTPHKRHHADTGLGGAGDPGGTAVVTRLGRDEGR
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcccgcgcttcttcgtcgacaagccgatcttcgcggcggtgctgtcgatcatg
atcttcgtggccggcctgatcgccatcatgcgcctgccgatctccgaatatccggaagtg
gtgccgccctccgtggtggtgcgcgcgcagtacccgggcgccaacccgaaggtgatcgcc
gagaccgtggccgcgccgctggaggagcagatcaacggcgtcgagaacatgctgtacatg
gactccaaggcgacctcggacggcgcgctggcgctgaccgtcacgttcaagatcggcacc
aacgcggagcaggccgagacccaggtgcagaaccgcgtgcagcgcgcgctgccgcgcctg
cccgaggaagtgcgccagatcggcgtgaccacggcgaagagctcgcccaacctgaccatg
gtggcgcacctgtcctcgcccaagggccgctacgacgacgtctacctgcgcaactacgcg
gtactgaacgtgaaggaccagctgtcgcgcattcccggcatgggcgaggtgatcctgttc
ggcgccggcgactacgcgatgcgggtgtggatcgacccgcagaagctggccgcgcgctcg
atgacggccggcgacgtggtgggcgcgatccgcgagcagaacgtgcaggtggccgccggc
gtggtcggcgcctcgcccaccaagggctcggaattccagctgacggtcaacacgaccggc
cggctgaagaccgtcgaggacttcggcaacgtcatcgtgcgcaccaacgcggacggcgcc
gtgaccttgctgcgcgacgtggcgcgggtggaactgggctcgaactcgtacgcgctgcgc
tcgctgctgaacaacaagtcggccgccgccatcggcatcttcgaggcgcccggcgccaac
gcgctgcagctgtcgcaggacgtgcgcgacacgctggccgcgctgtccaaggatttcccg
gaggacgtcgagttctccatcgtctacgacccgacgcaattcgtgcgcgagtcgatccgc
gccgtcatccacaccctgctggaagccgtggcattggtcgtggtcgtcgtcatcgtcttc
ctgcagacgtggcgcgcgtcgatcatcccgctgctggcggtacccgtttccatcgtcggc
acgttcgccgtcatgctggggttcggcttttccatcaacacgctgtcgctgttcgggctc
gtgctggcgatcggtatcgtggtggacgacgccatcgtcgtggtggagaacgtggagcgc
aacatcgccgcgggcttgacgccgcacgacgccacgatccaggcgatgagggaagtgtcc
ggcccgatcatcgccatcgccctggtgctgtgcgccgtgttcgtgccgatcgccttcgta
tccggcctgaccgggcagttctaccgccagttcgccctgaccatcgccatctccaccgtc
atttccgccctgtgctcgctgaccctggcgccggccctgtcggccgccctgctgcgcagc
cacgatgcgcccaaggatgcgctgacgcgcgccatggaccgcgtgttcggccccttcttc
ggctggttcaaccgcttcttcggccgcgcctcgcacgcctacgggcgcggcgtgcagcgc
gtgatggtgcgcaagggcctcggcatcggcgtctacctggtgctgaccgtggccgccgtg
ttcgtgttccgcgccgtaccgtccggcttcgtgccgggacaggacaagcagtacctggtc
ggcttcgcccagctgcccgatgccgcctcgctggaccgcaccgatgccgtggtgcggcgc
atgtccgacatcgccaagggcgtgcccggcgtgatggactcgatcgccttccccggcctg
tcgatcaacggcttcaccaatgcgcccaacgccggtatcgtgttcgtcggcttgaagcca
ttccacgaacggcgctcggccgagctgtccggcggcgccatcgcggcggaagtgaacaag
cgactgggcgccatccaggatgcgttcatcatggtgttcccgccgccccccgtcaacggc
ctgggcaccatcggcggcttcaagatgatggtggaggaccgcggcaacctgggctacgac
gaactgtacaaggccacccaggcgctgcagatgaaggcctggcagaacccgcagctggcc
ggcgtgttctccagctaccagatcaacgtgccgcagctgttcgccgacgtcgaccgcacc
cgcgccaagcagctgggcgtgccgctggccaccgtctaccagaccttgcagatcaacctg
ggttcgctgtacgtcaacgacttcaaccagtttggccggacctaccaggtcgtggtgcag
gcggacgcgccgttccgctcccagcgcgagcagatcgcccagctgaaggtgcgcaacgac
agaggcgaaatgatcccgctgtcgtcgctgatgcgcatctccgacacctacgggccggac
atggtcaaccgctacaacgcctacctggcggcggacatcagcggcggcgcggcgccgggg
gtatcgtccggccaggcgcaggaggcgatgtcgcagctggcacgcgagacgctgcccaag
gggatctcgttcgagtggaccgacctgacgtatcaggaaatcctggccgggaacacgatg
gtctacgtgttcccgctgtgcgtgctgctggtgttcctggtgctggccgcgcagtacgag
agctggaccttgccgctggccgtgatcctgatcgtgccgatgtcgatcctgtgcgccctg
ctgggcgtgaagctgacgggtggcgacaacaacgtgttcacccagatcgcgctgttcgtg
ctggtcggcctggcctcgaagaacgcgatcctgatcgtggaattcgcgcgcgagctggag
gaccacggccgcaacgtcgtgcaggccgcgctggaagcctgccggctgcggctgcgcccg
atcctgatgacgtccatcgcgttcatcatgggcgtgctgccgctggtattctccagcggc
gcgggcgcggagatgcgccacgcgatgggcgtggccgtgtttgccggcatgctgggcgtg
acgttcttcgggctgttcctgacgccgctgttctacgtgctgctgcgcaccctggcgctg
cggctgtcgcacagcacgccgcacaagcggcaccatgccgataccggcttgggcggagct
ggcgatcctggcgggacggcggtcgttacgcggcttggacgggatgaagggcgctga
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